RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 F2RL3Q96RI0 385 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 TAAR6Q96RI8 345 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 LPAR4Q99677 370 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 TBCDQ9BTW9 1192 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 CCDC28BQ9BUN5 200 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 NECTIN3Q9NQS3 549 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 C1orf109Q9NX04 203 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 TEKT2Q9UIF3 430 aa15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 ERRFI1Q9UJM3 462 aaPredicted RBP15.94■□□□□ 0.14
PRPF40A-204ENST00000450303 ATP6AP2A0A1C7CYW4 349 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 A1L4Q6 167 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 OR5H15A6NDH6 313 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 PSMD12O00232 456 aaPredicted RBP15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 SDHDO14521 159 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ZNF195O14628 629 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ERI3O43414 337 aaKnown RBP15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 PRMT3O60678 531 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 SH3BGRLO75368 114 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ATP6AP2O75787 350 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 LBPP18428 481 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 MAPK1P28482 360 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 IDH3AP50213 366 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 PLA2G16P53816 162 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 SLC26A5P58743 744 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 BNIP1Q12981 228 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 EXT1Q16394 746 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 GALNTL6Q49A17 601 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ACER2Q5QJU3 275 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 H3F3CQ6NXT2 135 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 Q6ZSR9 355 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 RFWD2Q8NHY2 731 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ACTRT2Q8TDY3 377 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 MAELQ96JY0 434 aaKnown RBP15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ZNF354BQ96LW1 612 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 KCNC2Q96PR1 638 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 NPAS2Q99743 824 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 COPS7BQ9H9Q2 264 aaPredicted RBP15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 OLAHQ9NV23 265 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ANKRD10Q9NXR5 420 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 TMED5Q9Y3A6 229 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 PTGDR2Q9Y5Y4 395 aa15.93■□□□□ 0.14
PRPF40A-204ENST00000450303 ARHGAP10A1A4S6 786 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 LSM1O15116 133 aaKnown RBP15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 PEX11AO75192 247 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 TBX6O95947 436 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 JUNP05412 331 aaKnown RBP15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 PCSK2P16519 638 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 EPHA3P29320 983 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 SLC9B1Q4ZJI4 515 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 OR4C11Q6IEV9 310 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 QSOX2Q6ZRP7 698 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 SPATA19Q7Z5L4 167 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 METTL4Q8N3J2 472 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 KIF2BQ8N4N8 673 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 BCORP1Q8N888 145 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 OR2T11Q8NH01 316 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 SUN3Q8TAQ9 357 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 CHTF18Q8WVB6 975 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 C3orf30Q96M34 536 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 RAB3IPQ96QF0 476 aaPredicted RBP15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 TMEM120AQ9BXJ8 343 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 RNF32Q9H0A6 362 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 AKTIPQ9H8T0 292 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 MMP25Q9NPA2 562 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 TCF7L2Q9NQB0 619 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 ADAM29Q9UKF5 820 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 TRIM33Q9UPN9 1127 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 OSGIN2Q9Y236 505 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 EIF3LQ9Y262 564 aaKnown RBP15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 CCL27Q9Y4X3 112 aa15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 SPTAN1Q13813 2472 aaKnown RBP15.92■□□□□ 0.14
PRPF40A-204ENST00000450303 SPTBN1Q01082 2364 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 GOLGA8QA0A0J9YX86 632 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 GOLGA8OA6NCC3 632 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 GOLGA8NF8WBI6 632 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 SAP18O00422 153 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 PRAMEF2O60811 474 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 ETHE1O95571 254 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 EDN3P14138 238 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 SSR2P43308 183 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 ERVK-8P63133 956 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 RPL38P63173 70 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 MEP1AQ16819 746 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 C6orf136Q5SQH8 315 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 FAM219BQ5XKK7 198 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 ABHD17CQ6PCB6 329 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 LARP4Q71RC2 724 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 MAVSQ7Z434 540 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 NUDT13Q86X67 352 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 FNDC5Q8NAU1 212 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 TMEM52Q8NDY8 209 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 APIPQ96GX9 242 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 SIGLEC12Q96PQ1 595 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 MRPL1Q9BYD6 325 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 CDCP1Q9H5V8 836 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 WDR55Q9H6Y2 383 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 CLK4Q9HAZ1 481 aaKnown RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 PRDM9Q9NQV7 894 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 SAR1AQ9NR31 198 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms