RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 ZNF780BQ9Y6R6 833 aa16.69■□□□□ 0.26
LMNA-208ENST00000448611 HCRTR1O43613 425 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 SEC24DO94855 1032 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 RECKO95980 971 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 C9P02748 559 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 FHP07954 510 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 OR12D1P0DN82 309 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 MATN1P21941 496 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 RRM2P31350 389 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 DAPP51397 102 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 SIM2Q14190 667 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 KDM4DQ6B0I6 523 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 BHLHB9Q6PI77 547 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 PRSS41Q7RTY9 318 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 C17orf82Q86X59 251 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 SLC44A2Q8IWA5 706 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 METTL25Q8N6Q8 603 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 CSNK1A1LQ8N752 337 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 OR5D16Q8NGK9 328 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 OR9A2Q8NGT5 310 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 MOAP1Q96BY2 351 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 ZNF300Q96RE9 604 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 ZNF347Q96SE7 839 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 CXorf56Q9H5V9 222 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 RUBCNLQ9H714 662 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 FAM60AQ9NP50 221 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 MS4A12Q9NXJ0 267 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 P2RX2Q9UBL9 471 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 DOLKQ9UPQ8 538 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 ZNF451Q9Y4E5 1061 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 PCDHGB3Q9Y5G1 929 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 SLC22A7Q9Y694 548 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 MITFO75030 526 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 UBXN7O94888 489 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 MFN2O95140 757 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 PABPC4LP0CB38 370 aaKnown RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 CD247P20963 164 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 IGFBP5P24593 272 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 CXCL12P48061 93 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 KHKP50053 298 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 RAD23AP54725 363 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 DUSP7Q16829 419 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 CYP27C1Q4G0S4 372 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 SATL1Q86VE3 508 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 TMEFF1Q8IYR6 380 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 ZNF555Q8NEP9 628 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 OR56A1Q8NGH5 318 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 MIPOL1Q8TD10 442 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 APOBEC4Q8WW27 367 aaKnown RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 ELP4Q96EB1 424 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 RSPO3Q9BXY4 272 aaPredicted RBP16.68■□□□□ 0.26
LMNA-208ENST00000448611 LYRM4Q9HD34 91 aa16.68■□□□□ 0.26
LMNA-208ENST00000448611 SCN3AQ9NY46 2000 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 ADAMDEC1O15204 470 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 AQP9O43315 295 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 HMGN2P05204 90 aaKnown RBP16.67■□□□□ 0.26
LMNA-208ENST00000448611 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
LMNA-208ENST00000448611 ITGA2P17301 1181 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 MC3RP41968 323 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 PRKAG1P54619 331 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 OLR1P78380 273 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 SYPL1Q16563 259 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 FAHD1Q6P587 224 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 KLHL35Q6PF15 583 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 C19orf47Q8N9M1 422 aaKnown RBP16.67■□□□□ 0.26
LMNA-208ENST00000448611 XAGE5Q8WWM1 108 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 TRPC4Q9UBN4 977 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 SH3GLB1Q9Y371 365 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 ORC6Q9Y5N6 252 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 LYVE1Q9Y5Y7 322 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 GON4LQ3T8J9 2241 aa16.67■□□□□ 0.26
LMNA-208ENST00000448611 ZNF860A6NHJ4 632 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 LILRA5A6NI73 299 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 SLC16A6O15403 523 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 EMC8O43402 210 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 SLC28A2O43868 658 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 PDE9AO76083 593 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 CDH3P22223 829 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 POLR2IP36954 125 aaKnown RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 XCR1P46094 333 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 CAPZBP47756 277 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 VSX2P58304 361 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 HNRNPKP61978 463 aaKnown RBP eCLIP16.66■□□□□ 0.26
LMNA-208ENST00000448611 SIM1P81133 766 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 PRR5P85299 388 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 LASP1Q14847 261 aaKnown RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 LRRC25Q8N386 305 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 PIK3C3Q8NEB9 887 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 GPR32P1Q8NGA4 272 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 DNASE2BQ8WZ79 361 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 TREX2Q9BQ50 279 aaPredicted RBP16.66■□□□□ 0.26
LMNA-208ENST00000448611 GRIP2Q9C0E4 1043 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 EPB41L1Q9H4G0 881 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 SIT1Q9Y3P8 196 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 TESMINQ9Y4I5 508 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 NCOR1O75376 2440 aa16.66■□□□□ 0.26
LMNA-208ENST00000448611 KNL1Q8NG31 2342 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms