RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 ULK2Q8IYT8 1036 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 DND1Q8IYX4 353 aaKnown RBP14.28□□□□□ -0.12
TRA2A-203ENST00000448549 LIX1Q8N485 282 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 NEIL3Q8TAT5 605 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 RIT1Q92963 219 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 NXNL1Q96CM4 212 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 DOHHQ9BU89 302 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 POLDIP3Q9BY77 421 aaKnown RBP14.28□□□□□ -0.12
TRA2A-203ENST00000448549 WWTR1Q9GZV5 400 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 GRHL1Q9NZI5 618 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 CNOT11Q9UKZ1 510 aaKnown RBP14.28□□□□□ -0.12
TRA2A-203ENST00000448549 ASB4Q9Y574 426 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 ANGPTL3Q9Y5C1 460 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 NF1P21359 2839 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 MTORP42345 2549 aa14.28□□□□□ -0.12
TRA2A-203ENST00000448549 A0A1W2PR48 441 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 FAM187AA6NFU0 413 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 RAD51CO43502 376 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 TMPRSS11DO60235 418 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 CLPSP04118 112 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 GSTA2P09210 222 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 PTX3P26022 381 aaPredicted RBP14.27□□□□□ -0.13
TRA2A-203ENST00000448549 UQCRC1P31930 480 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 BSGP35613 385 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 KIR2DL3P43628 341 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 EBPQ15125 230 aaKnown RBP14.27□□□□□ -0.13
TRA2A-203ENST00000448549 SPRED3Q2MJR0 410 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 UCN3Q969E3 161 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 PELOQ9BRX2 385 aaKnown RBP14.27□□□□□ -0.13
TRA2A-203ENST00000448549 ZNF717Q9BY31 904 aaPredicted RBP14.27□□□□□ -0.13
TRA2A-203ENST00000448549 LIME1Q9H400 295 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 ACTR8Q9H981 624 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 CCM2LQ9NUG4 571 aaPredicted RBP14.27□□□□□ -0.13
TRA2A-203ENST00000448549 ZNF358Q9NW07 568 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 QPCTLQ9NXS2 382 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 CRIM1Q9NZV1 1036 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 B4GALT7Q9UBV7 327 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 ACOT9Q9Y305 439 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 PCDHGB3Q9Y5G1 929 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 PCDHGA11Q9Y5H2 935 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 ZNF407Q9C0G0 2248 aa14.27□□□□□ -0.13
TRA2A-203ENST00000448549 SPG11Q96JI7 2443 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 HCFC1P51610 2035 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 A0A0A6YYD5 115 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 C15orf38-AP3S2A0A0A6YYH1 394 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 LRRC14BA6NHZ5 514 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 HSPB2A8KAH6 182 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 KDM4EB2RXH2 506 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 SYT5O00445 386 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 FAM58BPP0C7Q3 252 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 NR2F6P10588 404 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 CD99P14209 185 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 GDF1P27539 372 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 ARFIP1P53367 373 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 PLTPP55058 493 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 WNT3P56703 355 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 IRF9Q00978 393 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 DUSP8Q13202 625 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 HSPB2Q16082 182 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 NTRK2Q16620 822 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 CPSF6Q16630 551 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■□□□ 13.9
TRA2A-203ENST00000448549 PFKFB4Q16877 469 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 LIPJQ5W064 366 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 MRM1Q6IN84 353 aaKnown RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 CYP20A1Q6UW02 462 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 MAATS1Q7Z4T9 603 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 CCDC25Q86WR0 208 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 CENPLQ8N0S6 344 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 TAGAPQ8N103 731 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 NAXEQ8NCW5 288 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 TNIP2Q8NFZ5 429 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 FBF1Q8TES7 1133 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 KCTD4Q8WVF5 259 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 DIO2Q92813 273 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 FOXC2Q99958 501 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 GPATCH1Q9BRR8 931 aaKnown RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 TMUB1Q9BVT8 246 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 CLEC4MQ9H2X3 399 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 DDX31Q9H8H2 851 aaKnown RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 LYARQ9NX58 379 aaKnown RBP14.26□□□□□ -0.13
TRA2A-203ENST00000448549 TSC22D4Q9Y3Q8 395 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 ZFHX3Q15911 3703 aa14.26□□□□□ -0.13
TRA2A-203ENST00000448549 C2orf92A0A1B0GVN3 265 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 A0A1W2PS29 197 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 ANKRD33BA6NCL7 494 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 OR6C76A6NM76 312 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 SYCE1LA8MT33 242 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 H0YIV9 168 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 TRIM3O75382 744 aaPredicted RBP14.25□□□□□ -0.13
TRA2A-203ENST00000448549 AIFM1O95831 613 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 GBAP04062 536 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 SLC35E2P0CK97 266 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 GFAPP14136 432 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 BMP5P22003 454 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 SSTR4P31391 388 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 MAGEA4P43358 317 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 NEK2P51955 445 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 FBXW4P57775 412 aa14.25□□□□□ -0.13
TRA2A-203ENST00000448549 PHEXP78562 749 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms