RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FRMD6Q96NE9 622 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 F2RL3Q96RI0 385 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 NPAS2Q99743 824 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 SORBS1Q9BX66 1292 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 FAM107BQ9H098 131 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 TRIM45Q9H8W5 580 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 NPHS2Q9NP85 383 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ANKRD10Q9NXR5 420 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 TINAGQ9UJW2 476 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 NPIPA1Q9UND3 350 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 MEMO1Q9Y316 297 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 USH1CQ9Y6N9 552 aa12.83□□□□□ -0.36
PDLIM2-213ENST00000448520 GOLGA8QA0A0J9YX86 632 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 GOLGA8OA6NCC3 632 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 GOLGA8NF8WBI6 632 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 RTCAO00442 366 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 CHST10O43529 356 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 PRMT3O60678 531 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 ULK1O75385 1050 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 CLEC3AO75596 197 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 CDC123O75794 336 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 NEURL1O76050 574 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 POU3F2P20265 443 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 SSTR2P30874 369 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 CYB561P49447 251 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 QSOX2Q6ZRP7 698 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 SIAH3Q8IW03 269 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 TRPV3Q8NET8 790 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 PIWIL2Q8TC59 973 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 NT5CQ8TCD5 201 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 TSLPQ969D9 159 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 TMEM125Q96AQ2 219 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 REPS1Q96D71 796 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 LURAP1Q96LR2 239 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 HES7Q9BYE0 225 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 PITHD1Q9GZP4 211 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 WDR55Q9H6Y2 383 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 DCTN4Q9UJW0 460 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 SLC12A4Q9UP95 1085 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 TSC22D4Q9Y3Q8 395 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 CCL27Q9Y4X3 112 aa12.82□□□□□ -0.36
PDLIM2-213ENST00000448520 F8P00451 2351 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 LRIT2A6NDA9 550 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF860A6NHJ4 632 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 E9PLN8 166 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 SDHDO14521 159 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 PRRG2O14669 202 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 HDAC3O15379 428 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 MAN1A2O60476 641 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 CHEK2O96017 543 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 SNRPB2P08579 225 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 ZNF888P0CJ79 500 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 ABOP16442 354 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 DRD4P21917 467 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 PIK3CBP42338 1070 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 MLF1P58340 268 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 RAB8AP61006 207 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 DEFB134Q4QY38 66 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 SLC9B1Q4ZJI4 515 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 XKR7Q5GH72 579 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 Q6ZSR9 355 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 UBE3DQ7Z6J8 389 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 POGLUT1Q8NBL1 392 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 OR5T3Q8NGG3 340 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 PHF10Q8WUB8 498 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 APIPQ96GX9 242 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 VKORC1Q9BQB6 163 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 EBF4Q9BQW3 602 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 MRPL1Q9BYD6 325 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 SLC6A16Q9GZN6 736 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 CCDC168Q8NDH2 2452 aa12.81□□□□□ -0.36
PDLIM2-213ENST00000448520 DNAJC13O75165 2243 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 GMNCA6NCL1 334 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 PSMD12O00232 456 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 FOXE1O00358 373 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 FCHO1O14526 889 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 ERI3O43414 337 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 NME2P1O60361 137 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 DIAPH2O60879 1101 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 B4GALT2O60909 372 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 DNAJB6O75190 326 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 SLC25A12O75746 678 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 SNUPNO95149 360 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 SERPINA6P08185 405 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 RNH1P13489 461 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 CAPN3P20807 821 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 NME2P22392 152 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 TRHRP34981 398 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 HLCSP50747 726 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 PLA2G16P53816 162 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 AQP5P55064 265 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 PHEXP78562 749 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 IMPG1Q17R60 797 aa12.8□□□□□ -0.36
PDLIM2-213ENST00000448520 KHDRBS2Q5VWX1 349 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms