RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PIK3CGP48736 1102 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 NEK2P51955 445 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 BIKQ13323 160 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 GTF2H2Q13888 395 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 UAP1Q16222 522 aaPredicted RBP26.05■■□□□ 1.76
CBX4-202ENST00000448310 MRM1Q6IN84 353 aaKnown RBP26.05■■□□□ 1.76
CBX4-202ENST00000448310 GTF2H2CQ6P1K8 395 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 RNF111Q6ZNA4 994 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 GOLGA7Q7Z5G4 137 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 OR10G3Q8NGC4 313 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 ANP32BQ92688 251 aaKnown RBP26.05■■□□□ 1.76
CBX4-202ENST00000448310 SARAFQ96BY9 339 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 WWTR1Q9GZV5 400 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 ZNF703Q9H7S9 590 aaPredicted RBP26.05■■□□□ 1.76
CBX4-202ENST00000448310 PROK2Q9HC23 129 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.05■■□□□ 1.762e-7■■□□□ 14.3
CBX4-202ENST00000448310 CPSF2Q9P2I0 782 aaKnown RBP26.05■■□□□ 1.76
CBX4-202ENST00000448310 Q9UFV3 132 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 RNF11Q9Y3C5 154 aa26.05■■□□□ 1.76
CBX4-202ENST00000448310 H0YIV9 168 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 SIX3O95343 332 aaPredicted RBP26.04■■□□□ 1.76
CBX4-202ENST00000448310 HOXD4P09016 255 aaPredicted RBP26.04■■□□□ 1.76
CBX4-202ENST00000448310 NR2F6P10588 404 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 ADH7P40394 386 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 ALDH18A1P54886 795 aaKnown RBP26.04■■□□□ 1.76
CBX4-202ENST00000448310 PHEXP78562 749 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 SPRED3Q2MJR0 410 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 WLSQ5T9L3 541 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 SLC29A4Q7RTT9 530 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 LIX1LQ8IVB5 337 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 FBXW8Q8N3Y1 598 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 SLC15A4Q8N697 577 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 RIT1Q92963 219 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 ZNF559Q9BR84 538 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 IPPKQ9H8X2 491 aa26.04■■□□□ 1.76
CBX4-202ENST00000448310 LYARQ9NX58 379 aaKnown RBP26.04■■□□□ 1.76
CBX4-202ENST00000448310 A0A096LPK6 155 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 A0A1W2PS29 197 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 LRRC3CA6NJW4 275 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 KLK8O60259 260 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 AIFM1O95831 613 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 GBAP04062 536 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 CLPSP04118 112 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 FBXO45P0C2W1 286 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 FAM58BPP0C7Q3 252 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 ZFP36L2P47974 494 aaKnown RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 SLC37A1P57057 533 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 SLC7A5Q01650 507 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 ACAP2Q15057 778 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 EBPQ15125 230 aaKnown RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 PCBP2Q15366 365 aaKnown RBP eCLIP26.03■■□□□ 1.761e-6■■■□□ 15.4
CBX4-202ENST00000448310 UBAP2Q5T6F2 1119 aaKnown RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 C1orf185Q5T7R7 199 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 CYP20A1Q6UW02 462 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 REPS1Q96D71 796 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 JSRP1Q96MG2 331 aaPredicted RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 GPR78Q96P69 363 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 PELOQ9BRX2 385 aaKnown RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 SLC6A15Q9H2J7 730 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 DDX31Q9H8H2 851 aaKnown RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 ZFP64Q9NPA5 681 aa26.03■■□□□ 1.76
CBX4-202ENST00000448310 BOKQ9UMX3 212 aaPredicted RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 CHCHD2Q9Y6H1 151 aaPredicted RBP26.03■■□□□ 1.76
CBX4-202ENST00000448310 HCN1O60741 890 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 WDR1O75083 606 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 KLHL2O95198 593 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 ARFIP1P53367 373 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 CUL3Q13618 768 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 TMEM64Q6YI46 380 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 CCDC91Q7Z6B0 441 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 TMEM200AQ86VY9 491 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 WDR20Q8TBZ3 569 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 CDK15Q96Q40 435 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 EXPH5Q8NEV8 1989 aa26.02■■□□□ 1.76
CBX4-202ENST00000448310 UGDHO60701 494 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 SERPINB3P29508 390 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 MYBPHQ13203 477 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 SYT10Q6XYQ8 523 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 NUDT13Q86X67 352 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 L3MBTL4Q8NA19 623 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 VPS11Q9H270 941 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 WDR41Q9HAD4 459 aa26.01■■□□□ 1.75
CBX4-202ENST00000448310 CNOT11Q9UKZ1 510 aaKnown RBP26.01■■□□□ 1.75
CBX4-202ENST00000448310 ALDOAP04075 364 aaKnown RBP26■■□□□ 1.75
CBX4-202ENST00000448310 TYK2P29597 1187 aa26■■□□□ 1.75
CBX4-202ENST00000448310 SSTR4P31391 388 aa26■■□□□ 1.75
CBX4-202ENST00000448310 ARL1P40616 181 aaPredicted RBP26■■□□□ 1.75
CBX4-202ENST00000448310 TRPC1P48995 793 aa26■■□□□ 1.75
CBX4-202ENST00000448310 KLC3Q6P597 504 aa26■■□□□ 1.75
CBX4-202ENST00000448310 CLYBLQ8N0X4 340 aa26■■□□□ 1.75
CBX4-202ENST00000448310 PLD6Q8N2A8 252 aaKnown RBP26■■□□□ 1.75
CBX4-202ENST00000448310 LRRC25Q8N386 305 aaPredicted RBP26■■□□□ 1.75
CBX4-202ENST00000448310 NOL11Q9H8H0 719 aaKnown RBP26■■□□□ 1.75
CBX4-202ENST00000448310 ZNF358Q9NW07 568 aa26■■□□□ 1.75
CBX4-202ENST00000448310 TEX10Q9NXF1 929 aaPredicted RBP26■■□□□ 1.75
CBX4-202ENST00000448310 CNIH4Q9P003 139 aa26■■□□□ 1.75
CBX4-202ENST00000448310 KCNN3Q9UGI6 736 aa26■■□□□ 1.75
CBX4-202ENST00000448310 CCDC189A1A4V9 331 aa25.99■■□□□ 1.75
CBX4-202ENST00000448310 OR7A17O14581 309 aa25.99■■□□□ 1.75
CBX4-202ENST00000448310 PGRMC2O15173 223 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms