RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SFXN2Q96NB2 322 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 ATF6BQ99941 703 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 INPP5KQ9BT40 448 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 ACTR6Q9GZN1 396 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 ZNF451Q9Y4E5 1061 aa18.27■□□□□ 0.51
HMGA1-205ENST00000447654 TET1Q8NFU7 2136 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 TEX13CA0A0J9YWL9 993 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 A0A1B0GW55 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 FCER2P06734 321 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4L2P0CJ85 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4L3P0CJ86 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4L4P0CJ87 422 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4L5P0CJ88 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4L6P0CJ89 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4L7P0CJ90 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 TYMPP19971 482 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 IRS1P35568 1242 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 CRYZQ08257 329 aaKnown RBP18.26■□□□□ 0.51
HMGA1-205ENST00000447654 GPR17Q13304 367 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 GTF2H2Q13888 395 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 GTF2H2CQ6P1K8 395 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 SHFQ7M4L6 423 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 ABI3BPQ7Z7G0 1075 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 LAPTM4BQ86VI4 370 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 NAXDQ8IW45 347 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 OR4L1Q8NH43 312 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 NELL1Q92832 810 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 RFT1Q96AA3 541 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 HHIPQ96QV1 700 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DNTTIP1Q9H147 329 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 ESRP2Q9H6T0 727 aaKnown RBP18.26■□□□□ 0.51
HMGA1-205ENST00000447654 EQTNQ9NQ60 294 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 BABAM2Q9NXR7 383 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 DUX4Q9UBX2 424 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 PCDHB8Q9UN66 801 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 MED16Q9Y2X0 877 aa18.26■□□□□ 0.51
HMGA1-205ENST00000447654 PLATP00750 562 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 BPIP17213 487 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 OR1G1P47890 313 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 RPS14P62263 151 aaKnown RBP18.25■□□□□ 0.51
HMGA1-205ENST00000447654 RPL6Q02878 288 aaKnown RBP18.25■□□□□ 0.51
HMGA1-205ENST00000447654 IL10RBQ08334 325 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 MANEALQ5VSG8 457 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 SUSD1Q6UWL2 747 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 GLB1LQ6UWU2 654 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 SLC24A5Q71RS6 500 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 MILR1Q7Z6M3 343 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 SYNPOQ8N3V7 929 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 STPG2Q8N412 459 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 CD99L2Q8TCZ2 262 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 FCRL2Q96LA5 508 aaPredicted RBP18.25■□□□□ 0.51
HMGA1-205ENST00000447654 NIPSNAP1Q9BPW8 284 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 HDHD2Q9H0R4 259 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 ABCG5Q9H222 651 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 CLEC2DQ9UHP7 191 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 MYO16Q9Y6X6 1858 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 CLIC1O00299 241 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 SYN3O14994 580 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 MOCS2O96007 188 aaPredicted RBP18.25■□□□□ 0.51
HMGA1-205ENST00000447654 FABP1P07148 127 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 BCKDHAP12694 445 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 KCNJ5P48544 419 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 GATMP50440 423 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 CRISP1P54107 249 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 TPBGQ13641 420 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 CD200R1LQ6Q8B3 271 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 AFTPHQ6ULP2 937 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 OR1M1Q8NGA1 313 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 TM9SF4Q92544 642 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 KCNJ9Q92806 393 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 C1QTNF6Q9BXI9 259 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 NLNQ9BYT8 704 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 NDUFAF4Q9P032 175 aa18.25■□□□□ 0.51
HMGA1-205ENST00000447654 EXO1Q9UQ84 846 aaKnown RBP18.25■□□□□ 0.51
HMGA1-205ENST00000447654 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
HMGA1-205ENST00000447654 ENTPD6O75354 484 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 SMIM6P0DI80 62 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 RHCEP18577 417 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 SLC6A4P31645 630 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 BTCP35070 178 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 FAM189BP81408 668 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 GPNMBQ14956 572 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 NTRK2Q16620 822 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 AFMIDQ63HM1 303 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 LHX8Q68G74 356 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 OR6S1Q8NH40 331 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 TPD52L3Q96J77 140 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 SLC39A8Q9C0K1 460 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 THSD1Q9NS62 852 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 NUDT15Q9NV35 164 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 TMEM184CQ9NVA4 438 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 RLIMQ9NVW2 624 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 PPIEQ9UNP9 301 aaKnown RBP18.24■□□□□ 0.51
HMGA1-205ENST00000447654 MGAT4BQ9UQ53 548 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 SLC6A5Q9Y345 797 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 PCDHGA9Q9Y5G4 932 aaKnown RBP18.24■□□□□ 0.51
HMGA1-205ENST00000447654 TRAV20A0A0B4J274 112 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 D6RAR5 112 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 OAZ2O95190 189 aa18.24■□□□□ 0.51
HMGA1-205ENST00000447654 RASGRP1O95267 797 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms