RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 SPERTQ8NA61 448 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 OR2A1Q8NGT9 310 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 OR9A4Q8NGU2 314 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 NEUROG1Q92886 237 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 C3orf49Q96BT1 292 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 MARS2Q96GW9 593 aaKnown RBP5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 NAP1L5Q96NT1 182 aaPredicted RBP5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 RCHY1Q96PM5 261 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 HBEGFQ99075 208 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 STMN4Q9H169 189 aaPredicted RBP5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 CHCHD2Q9Y6H1 151 aaPredicted RBP5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 LRP5LA4QPB2 252 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 GNA14O95837 355 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 LHX2P50458 406 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 IDH3GP51553 393 aaPredicted RBP5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 GFRA1P56159 465 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 HSD17B7P56937 341 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SNTA1Q13424 505 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SLC1A5Q15758 541 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SLC9B1Q4ZJI4 515 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 COMTD1Q86VU5 262 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 GCNT2Q8N0V5 402 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 TM4SF19Q96DZ7 209 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SORCS2Q96PQ0 1159 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SMIM14Q96QK8 99 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 NDNQ99608 321 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 DOHHQ9BU89 302 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 FKRPQ9H9S5 495 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SMYD2Q9NRG4 433 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 KCNG2Q9UJ96 466 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 SOX13Q9UN79 622 aa5.57□□□□□ -1.52
BRAFP1-201ENST00000445336 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 TRBV5-4A0A0C4DH59 114 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 BECN2A8MW95 431 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 CALB1P05937 261 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 IL32P24001 234 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 NAGLUP54802 743 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 IFI35P80217 286 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 NIPAL4Q0D2K0 466 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 MSLNQ13421 630 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 GRB7Q14451 532 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 DCST1Q5T197 706 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 HECTD2Q5U5R9 776 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 PACS1Q6VY07 963 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 LDB1Q86U70 411 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 NDUFA11Q86Y39 141 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 PASD1Q8IV76 773 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 OR4N5Q8IXE1 308 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 CEP57L1Q8IYX8 460 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 ZSCAN4Q8NAM6 433 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SREK1Q8WXA9 508 aaKnown RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 DHX58Q96C10 678 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 ZNF48Q96MX3 618 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 UBE2TQ9NPD8 197 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 MCM8Q9UJA3 840 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 ADAMTS6Q9UKP5 1117 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 LSM4Q9Y4Z0 139 aaKnown RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 B9A039 149 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 RAMP3O60896 148 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 KRT3P12035 628 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 ITGALP20701 1170 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 TMED10P49755 219 aaKnown RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 CLDN18P56856 261 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SLC37A1P57057 533 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 NOMO3P69849 1222 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SLC35A2P78381 396 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SPRED3Q2MJR0 410 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 XKR6Q5GH73 641 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 TIMM23BQ5SRD1 257 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 CASC4Q6P4E1 433 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 ZNF620Q6ZNG0 422 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SNX20Q7Z614 316 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 C11orf42Q8N5U0 333 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SPPL2AQ8TCT8 520 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 SMPDL3AQ92484 453 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 ANKRD7Q92527 254 aa5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 NPLQ9BXD5 320 aaPredicted RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 MRPS30Q9NP92 439 aaKnown RBP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 RBM22Q9NW64 420 aaKnown RBP eCLIP5.56□□□□□ -1.52
BRAFP1-201ENST00000445336 CCDC151A5D8V7 595 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 TRAPPC6AO75865 159 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 RGS9O75916 674 aaPredicted RBP5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 AVPP01185 164 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 CALCAP01258 141 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 RNH1P13489 461 aaKnown RBP5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 PDHA2P29803 388 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 PIGAP37287 484 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 C21orf58P58505 322 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 RPS3AP61247 264 aaKnown RBP5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 SFRP5Q5T4F7 317 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 CCDC183Q5T5S1 534 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 SLC30A6Q6NXT4 461 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 FAHD2BQ6P2I3 314 aaPredicted RBP5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 SBSNQ6UWP8 590 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 FRRS1Q6ZNA5 592 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 CNPY4Q8N129 248 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 SYT8Q8NBV8 401 aa5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 FAM83FQ8NEG4 500 aaPredicted RBP5.55□□□□□ -1.52
BRAFP1-201ENST00000445336 CLDND2Q8NHS1 167 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms