RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 MLKLQ8NB16 471 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 CLEC18CQ8NCF0 446 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 DDHD1Q8NEL9 900 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 OR7A2PQ8NGA2 310 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 SLC2A14Q8TDB8 520 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 SMPDL3AQ92484 453 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 PIGCQ92535 297 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 HPDLQ96IR7 371 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 LURAP1Q96LR2 239 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 NEDD4LQ96PU5 975 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 DCTN5Q9BTE1 182 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 ZNF747Q9BV97 191 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 CXXC4Q9H2H0 198 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 KCNK13Q9HB14 408 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 MAN1B1Q9UKM7 699 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 INSL5Q9Y5Q6 135 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 CGNL1Q0VF96 1302 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 PHLPP2Q6ZVD8 1323 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 TAF1P21675 1872 aa4.69□□□□□ -1.66
TM9SF3-202ENST00000443638 IGLV5-37A0A075B6J1 123 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 ARHGEF35A5YM69 484 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 METTL21EPA6NDL7 271 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 WASHC1A8K0Z3 465 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 H3BTX0 84 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 CCSO14618 274 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 SYNGR3O43761 229 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 SAP30O75446 220 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PABPC4LP0CB38 370 aaKnown RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PNMTP11086 282 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PRF1P14222 555 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RFC2P35250 354 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 SGSHP51688 502 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 MAP2K1Q02750 393 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 KLF5Q13887 457 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 HADHQ16836 314 aaKnown RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PRTGQ2VWP7 1150 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 ZNF260Q3ZCT1 412 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 ZSCAN25Q6NSZ9 544 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 CWC27Q6UX04 472 aaKnown RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 DPY19L2P2Q6ZN68 376 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 Q6ZPB1 254 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 SLC24A5Q71RS6 500 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 LDLRAD3Q86YD5 345 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 SPATA2LQ8IUW3 424 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 NECAB1Q8N987 351 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 OR9K2Q8NGE7 335 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 GPR148Q8TDV2 347 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RPL3LQ92901 407 aaKnown RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PCED1BQ96HM7 432 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 KRT12Q99456 494 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 TRIM9Q9C026 710 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 FNDC4Q9H6D8 234 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RPAP3Q9H6T3 665 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 LPAR2Q9HBW0 351 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 ZFP14Q9HCL3 533 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RAB18Q9NP72 206 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 SMOXQ9NWM0 555 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PIPOXQ9P0Z9 390 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 DBF4Q9UBU7 674 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RALYQ9UKM9 306 aaKnown RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PRDM4Q9UKN5 801 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 ELF5Q9UKW6 265 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 GSTK1Q9Y2Q3 226 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 KLF2Q9Y5W3 355 aaPredicted RBP4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 ATP10DQ9P241 1426 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 KIF7Q2M1P5 1343 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 RNF123Q5XPI4 1314 aa4.68□□□□□ -1.66
TM9SF3-202ENST00000443638 PIK3R4Q99570 1358 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 SPATA31D1Q6ZQQ2 1576 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 PPIAL4CA0A0B4J2A2 164 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 ESYT2A0FGR8 921 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 SHISA7A6NL88 538 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 M0QX08 132 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 FOXE1O00358 373 aaPredicted RBP4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 BTN3A3O00478 584 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 SH2D1BO14796 132 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 NDUFB10O96000 172 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 TMEM191BP0C7N4 346 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 PPIAL4GP0DN37 164 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 MSH3P20585 1137 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 PSMA2P25787 234 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 MATKP42679 507 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 ETV1P50549 477 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 DNA2P51530 1060 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 FUT6P51993 359 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 CDH11P55287 796 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 HERVK_113P63132 956 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 ERVK-8P63133 956 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 COL10A1Q03692 680 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 SPAG1Q07617 926 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 NCBP1Q09161 790 aaKnown RBP4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 SQLEQ14534 574 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 SSX2Q16385 188 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 PARP6Q2NL67 630 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 PDSS1Q5T2R2 415 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 ECHDC2Q86YB7 292 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 ADHFE1Q8IWW8 467 aa4.67□□□□□ -1.66
TM9SF3-202ENST00000443638 UBE2J2Q8N2K1 259 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms