RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 SLC37A1P57057 533 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 DOC2AQ14183 400 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 EBPQ15125 230 aaKnown RBP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 BICRALQ6AI39 1079 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 ADGRE4PQ86SQ3 457 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 SRFBP1Q8NEF9 429 aaKnown RBP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 ANKRD49Q8WVL7 239 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 PTCD3Q96EY7 689 aaKnown RBP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 RBM18Q96H35 190 aaKnown RBP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 ART5Q96L15 291 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 DGAT2Q96PD7 388 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 TMEM79Q9BSE2 394 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 NAT9Q9BTE0 207 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 SFXN3Q9BWM7 321 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 ANGPTL4Q9BY76 406 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 FETUBQ9UGM5 382 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 C15orf41Q9Y2V0 281 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 TESMINQ9Y4I5 508 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 NPFFR2Q9Y5X5 522 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 RAI1Q7Z5J4 1906 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-208ENST00000443046 DSCAMO60469 2012 aa13.15□□□□□ -0.3
HMGN1-208ENST00000443046 TRIM64A6NGJ6 449 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 TRIM64BA6NI03 449 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 RTCAO00442 366 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 SMAD7O15105 426 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 SIAH2O43255 324 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ERN1O75460 977 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 RCBTB2O95199 551 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 TMIGD3P0DMS9 266 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 CPN1P15169 458 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 CPN2P22792 545 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 NAGLUP54802 743 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 SPRED3Q2MJR0 410 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ZNF662Q6ZS27 426 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 YTHDF3Q7Z739 585 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ADAMTSL2Q86TH1 951 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ST13P4Q8IZP2 240 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ZNF473Q8WTR7 871 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 DIO2Q92813 273 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 TANKQ92844 425 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ABTB1Q969K4 478 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 RILPQ96NA2 401 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 GNRHR2Q96P88 292 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 SECISBP2Q96T21 854 aaKnown RBP13.14□□□□□ -0.31
HMGN1-208ENST00000443046 EFCAB11Q9BUY7 163 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 TRPS1Q9UHF7 1281 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 SPACA6W5XKT8 324 aa13.14□□□□□ -0.31
HMGN1-208ENST00000443046 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 ROS1P08922 2347 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 OR6C76A6NM76 312 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 DEFB108AA8MXU0 73 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 CES2O00748 559 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TP53I11O14683 189 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 DYRK3O43781 588 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 ALOX15P16050 662 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 EPORP19235 508 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 CASP2P42575 452 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 RPL21P46778 160 aaKnown RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 PCYT1AP49585 367 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 FBXW4P57775 412 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 PPP2R2BQ00005 443 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 PLIN5Q00G26 463 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 ZNF460Q14592 562 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 RPS6KA2Q15349 733 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TGFBIQ15582 683 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TSNQ15631 228 aaKnown RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TBCCQ15814 346 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TMEM35AQ53FP2 167 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 EIPR1Q53HC9 387 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TRMT10BQ6PF06 316 aaKnown RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 SPPL2AQ8TCT8 520 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 TP53INP1Q96A56 240 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 GAL3ST4Q96RP7 486 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 MS4A12Q9NXJ0 267 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 CTNNAL1Q9UBT7 734 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 EIF3LQ9Y262 564 aaKnown RBP13.13□□□□□ -0.31
HMGN1-208ENST00000443046 PSAT1Q9Y617 370 aa13.13□□□□□ -0.31
HMGN1-208ENST00000443046 IQANK1A0A1B0GTG1 560 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 A8MXE2 369 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 CASKO14936 926 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 CLGNO14967 610 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 CTIFO43310 598 aaKnown RBP13.12□□□□□ -0.31
HMGN1-208ENST00000443046 WISP3O95389 354 aaPredicted RBP13.12□□□□□ -0.31
HMGN1-208ENST00000443046 ACTL6AO96019 429 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 PTPN6P29350 595 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 GALNSP34059 522 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 CASP3P42574 277 aa13.12□□□□□ -0.31
HMGN1-208ENST00000443046 TAS2R39P59534 338 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms