RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 JKAMPQ9P055 326 aa11.72□□□□□ -0.53
TRIM13-205ENST00000442421 ATRQ13535 2644 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 MBD3L4A6NDZ8 208 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 MBD3L3A6NE82 208 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 MBD3L5A6NJ08 208 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 CD8B2A6NJW9 211 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 PGRMC1O00264 195 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 SCELO95171 688 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 TGFB1P01137 390 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 ALOX15P16050 662 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 EPORP19235 508 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 CTSSP25774 331 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 FNTAP49354 379 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 CDK9P50750 372 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 FBXW4P57775 412 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 ZNF267Q14586 743 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 EBPQ15125 230 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 TOMM20Q15388 145 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 PDK4Q16654 411 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 AP5B1Q2VPB7 878 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 EIPR1Q53HC9 387 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 FNDC7Q5VTL7 733 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 STEAP4Q687X5 459 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 C18orf63Q68DL7 685 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 VASNQ6EMK4 673 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 RNF111Q6ZNA4 994 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 GAS2L3Q86XJ1 694 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 C9orf106Q8NAJ2 232 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 SRFBP1Q8NEF9 429 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 MBD3L2Q8NHZ7 208 aaPredicted RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 ZNF473Q8WTR7 871 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 WDR34Q96EX3 536 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 WDYHV1Q96HA8 205 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 PBKQ96KB5 322 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 COX4I2Q96KJ9 171 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 RILPQ96NA2 401 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 GNRHR2Q96P88 292 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 EFCAB11Q9BUY7 163 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 UGT2B28Q9BY64 529 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 RPF2Q9H7B2 306 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 CNOT10Q9H9A5 744 aaKnown RBP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRIM13-205ENST00000442421 GALNT8Q9NY28 637 aa11.71□□□□□ -0.53
TRIM13-205ENST00000442421 SH3D21A4FU49 640 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 FAM171A2A8MVW0 826 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 H7C1Q1 480 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 STK16O75716 305 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 GOSR1O95249 250 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 CLPSP04118 112 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 HPNP05981 417 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 TMIGD3P0DMS9 266 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 PCNAP12004 261 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 BMP7P18075 431 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 OPRM1P35372 400 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 SOX18P35713 384 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 GGT5P36269 586 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 SLC37A1P57057 533 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 IRF8Q02556 426 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 FOXF2Q12947 444 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 CHIT1Q13231 466 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 SLAMF1Q13291 335 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 LAPTM5Q13571 262 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 RPS6KA2Q15349 733 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 TMEM35AQ53FP2 167 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 PAGE2BQ5JRK9 111 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 WIPI1Q5MNZ9 446 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 GPSM1Q86YR5 675 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 ANKMY2Q8IV38 441 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 P3H2Q8IVL5 708 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 PDIK1LQ8N165 341 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 TCAIMQ8N3R3 496 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 RNF175Q8N4F7 328 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 LRRN4CLQ8ND94 238 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 NAP1L3Q99457 506 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 REPIN1Q9BWE0 567 aaKnown RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 RBM24Q9BX46 236 aaKnown RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 DERL2Q9GZP9 239 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 OR51B5Q9H339 312 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 UBQLN3Q9H347 655 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 TEX10Q9NXF1 929 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 C15orf41Q9Y2V0 281 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 TEX264Q9Y6I9 313 aa11.7□□□□□ -0.54
TRIM13-205ENST00000442421 RAI1Q7Z5J4 1906 aaPredicted RBP11.7□□□□□ -0.54
TRIM13-205ENST00000442421 ANKRD33BA6NCL7 494 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 GLOD5A6NK44 160 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 WASHC1A8K0Z3 465 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 TP53I11O14683 189 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 SMAD7O15105 426 aaKnown RBP11.69□□□□□ -0.54
TRIM13-205ENST00000442421 ARHGEF9O43307 516 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 OR10H2O60403 315 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
TRIM13-205ENST00000442421 ERN1O75460 977 aaKnown RBP11.69□□□□□ -0.54
TRIM13-205ENST00000442421 IL18BPO95998 194 aa11.69□□□□□ -0.54
TRIM13-205ENST00000442421 SLCO1A2P46721 670 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms