RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-210	ENST00000442216	RPL14	P50914	215 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF169	Q14929	603 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	XKR7	Q5GH72	579 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	RPUSD3	Q6P087	351 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	BEST3	Q8N1M1	668 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	OR5L2	Q8NGL0	311 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PPWD1	Q96BP3	646 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PPP3R2	Q96LZ3	170 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	UTP23	Q9BRU9	249 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	EBPL	Q9BY08	206 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	EPN3	Q9H201	632 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CXorf21	Q9HAI6	301 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	HEY2	Q9UBP5	337 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PCDHGB6	Q9Y5F9	930 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CSAG2	Q9Y5P2	127 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PTGDR2	Q9Y5Y4	395 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF780B	Q9Y6R6	833 aa		13.99	□□□□□ -0.17
CSNK1E-210	ENST00000442216	OR6C76	A6NM76	312 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TTLL8	A6PVC2	850 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	GABRR3	A8MPY1	467 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	LYPLA1	O75608	230 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ERAL1	O75616	437 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	DDC	P20711	480 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MAPK1	P28482	360 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TRHR	P34981	398 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ALDH9A1	P49189	494 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	RNF4	P78317	190 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	BST1	Q10588	318 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TUBA3C	Q13748	450 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CEBPE	Q15744	281 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	INA	Q16352	499 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	C6orf163	Q5TEZ5	329 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ATG16L1	Q676U5	607 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	FCRLB	Q6BAA4	426 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	FAM71E1	Q6IPT2	247 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TUBA3E	Q6PEY2	450 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	DGAT2L6	Q6ZPD8	337 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	GALNT12	Q8IXK2	581 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	HORMAD2	Q8N7B1	307 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF781	Q8N8C0	355 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SUN3	Q8TAQ9	357 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	NUBPL	Q8TB37	319 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	AGR3	Q8TD06	166 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	KLHL29	Q96CT2	875 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CNRIP1	Q96F85	164 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF764	Q96H86	408 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF681	Q96N22	645 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SORT1	Q99523	831 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	C20orf27	Q9GZN8	174 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	GIMAP4	Q9NUV9	329 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	THAP1	Q9NVV9	213 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TAS2R7	Q9NYW3	318 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PLA2G3	Q9NZ20	509 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MYOT	Q9UBF9	498 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	UTS2R	Q9UKP6	389 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	YARS2	Q9Y2Z4	477 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	POLR3H	Q9Y535	204 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PCDHGA10	Q9Y5H3	936 aa		13.98	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CFAP46	Q8IYW2	2715 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TMEM200C	A6NKL6	621 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SNN	O75324	88 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PLA2G2A	P14555	144 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CD96	P40200	585 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ERVK-8	P63133	956 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TLE1	Q04724	770 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	C2orf80	Q0P641	193 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	FUT7	Q11130	342 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MAP4K2	Q12851	820 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF267	Q14586	743 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SMU1	Q2TAY7	513 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ATP6AP1L	Q52LC2	224 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	RFTN2	Q52LD8	501 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TTMP	Q5BVD1	217 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	GPALPP1	Q8IXQ4	340 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MMP21	Q8N119	569 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	LRRC25	Q8N386	305 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF321P	Q8N8H1	164 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CATSPER1	Q8NEC5	780 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	OR7G1	Q8NGA0	311 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CNPPD1	Q9BV87	410 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.97	□□□□□ -0.17	3e-8	■□□□□ 9.5
CSNK1E-210	ENST00000442216	ERVK-19	Q9WJR5	959 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SHANK1	Q9Y566	2161 aa		13.97	□□□□□ -0.17
CSNK1E-210	ENST00000442216		A0A1W2PS29	197 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	KLF11	O14901	512 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PRKN	O60260	465 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MAN1A2	O60476	641 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	TBX19	O60806	448 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PRAMEF2	O60811	474 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SKAP2	O75563	359 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ITGA10	O75578	1167 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	FEN1	P39748	380 aa	Known RBP	13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ASMT	P46597	345 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CYB561	P49447	251 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	HLCS	P50747	726 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	HK2	P52789	917 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SLC37A1	P57057	533 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	RPL38	P63173	70 aa	Known RBP	13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms