RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ASF1AQ9Y294 204 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 BTRCQ9Y297 605 aa4.51□□□□□ -1.69
PTPN4-206ENST00000441089 C22orf46C9J442 243 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 INAFM1C9JVW0 142 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 E7ENX8 843 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 K7EPI3 171 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 IFRD1O00458 451 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 CYR61O00622 381 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PEX12O00623 359 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TBX1O43435 398 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PROM1O43490 865 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SNX3O60493 162 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 H2AFYO75367 372 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 STK16O75716 305 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 RASSF9O75901 435 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 WDR47O94967 919 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 OR4F21O95013 312 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 UNC5CO95185 931 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 HSPA4LO95757 839 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 FAM107AO95990 144 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 S100BP04271 92 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 HIST1H2AGP0C0S8 130 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 F3P13726 295 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SLC2A4P14672 509 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 ALOX15P16050 662 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 IGFBP2P18065 325 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 CD22P20273 847 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 HIST1H2ADP20671 130 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PSMB5P28074 263 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PEBP1P30086 187 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SERPINB5P36952 375 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 MAPK9P45984 424 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 HTR6P50406 440 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TDGF1P3P51864 188 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PNLIPRP1P54315 467 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TBPL1P62380 186 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TAP2Q03519 686 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 RUNX1T1Q06455 604 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 GABPB1Q06547 395 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 GALNT1Q10472 559 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 MYBPHQ13203 477 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TUBB3Q13509 450 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 NAE1Q13564 534 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 GTF2H2Q13888 395 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 INAQ16352 499 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 CYP2A13Q16696 494 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 UGT3A2Q3SY77 523 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TUBB8Q3ZCM7 444 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 CFAP157Q5JU67 520 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TCHHL1Q5QJ38 904 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SH2D4BQ5SQS7 431 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 IRAK1BP1Q5VVH5 260 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF324BQ6AW86 544 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 CLEC6AQ6EIG7 209 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 MRM1Q6IN84 353 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 GTF2H2CQ6P1K8 395 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 IYDQ6PHW0 289 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SUSD1Q6UWL2 747 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 LRRC70Q7Z2Q7 622 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PIGWQ7Z7B1 504 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 WDR75Q8IWA0 830 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TCAIMQ8N3R3 496 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 C2orf73Q8N5S3 287 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TEX9Q8N6V9 391 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 LINC00482Q8N8I6 264 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 ENDOVQ8N8Q3 282 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 WFDC11Q8NEX6 87 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 OR52E1Q8NGJ3 308 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 AGR3Q8TD06 166 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SLC37A2Q8TED4 501 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 DIO2Q92813 273 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 RNF31Q96EP0 1072 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 RMND5BQ96G75 393 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 HIST1H2AHQ96KK5 128 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC138Q96M89 665 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 FOPNLQ96NB1 174 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 KCNA7Q96RP8 456 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 HIST1H2AJQ99878 128 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 EBF4Q9BQW3 602 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 H2AFJQ9BTM1 129 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TRIM54Q9BYV2 358 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SPNS1Q9H2V7 528 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TUBB1Q9H4B7 451 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 EPS8L2Q9H6S3 715 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 KIR3DX1Q9H7L2 352 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 NOL11Q9H8H0 719 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 MID1IP1Q9NPA3 183 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 DNAJC11Q9NVH1 559 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 INTS7Q9NVH2 962 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SPHK1Q9NYA1 384 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SPATA7Q9P0W8 599 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 NTMQ9P121 344 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 OPTCQ9UBM4 332 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SEC14L3Q9UDX4 400 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SH3BGRL2Q9UJC5 107 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TMCO1Q9UM00 188 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 SLC22A14Q9Y267 594 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PADI2Q9Y2J8 665 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 TDRKHQ9Y2W6 561 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 RAP2CQ9Y3L5 183 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms