RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TMEM163Q8TC26 289 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 ZNF431Q8TF32 576 aaPredicted RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 MYLIPQ8WY64 445 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 TRMT2BQ96GJ1 504 aaKnown RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 GFM1Q96RP9 751 aaKnown RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 DUSP26Q9BV47 211 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 KATNB1Q9BVA0 655 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 SLC46A2Q9BY10 475 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 PIGUQ9H490 435 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 RANBP3Q9H6Z4 567 aaPredicted RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 FOLH1BQ9HBA9 442 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 RABL2AQ9UBK7 228 aaPredicted RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 NDOR1Q9UHB4 597 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 YBX2Q9Y2T7 364 aaKnown RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 PCDHB9Q9Y5E1 797 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 NUP214P35658 2090 aaPredicted RBP11.32□□□□□ -0.6
LTBR-203ENST00000441074 DOCK6Q96HP0 2047 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 MYO9BQ13459 2157 aa11.32□□□□□ -0.6
LTBR-203ENST00000441074 TRBV5-4A0A0C4DH59 114 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 J3KTA2 159 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 SGK494L7N484 410 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 PCDH7O60245 1069 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 TBL1XO60907 577 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 MTRF1O75570 445 aaKnown RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 GADD45GO95257 159 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 LRG1P02750 347 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 C1SP09871 688 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 EPCAMP16422 314 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 ATF4P18848 351 aaPredicted RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 POU1F1P28069 291 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 RHOAP61586 193 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 MADCAM1Q13477 382 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 RIN1Q13671 783 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 CXorf57Q6NSI4 855 aaKnown RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 FAM151BQ6UXP7 276 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 PDZD3Q86UT5 571 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 GALNT11Q8NCW6 608 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 OR6K2Q8NGY2 324 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 MTERF3Q96E29 417 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 ASB8Q9H765 288 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 B3GAT2Q9NPZ5 323 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 DNAJC27Q9NZQ0 273 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 CFAP97Q9P2B7 532 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 FBXO9Q9UK97 447 aaPredicted RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 PRSS21Q9Y6M0 314 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 ZNF106Q9H2Y7 1883 aaKnown RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 LOC102723532A0A0G2JNH3 316 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 LINC01553A4QN01 128 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 GAPDHSO14556 408 aaPredicted RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 SLC9A3R1O14745 358 aaPredicted RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 CD160O95971 181 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 HK1P19367 917 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 ENPP1P22413 925 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 LHCGRP22888 699 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 SRP54P61011 504 aaKnown RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 ZNF91Q05481 1191 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 BAMBIQ13145 260 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 ZNF267Q14586 743 aaPredicted RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 COL28A1Q2UY09 1125 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 GPR33Q49SQ1 333 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 KLHL22Q53GT1 634 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 FRG2Q64ET8 278 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 BICRALQ6AI39 1079 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 USP30Q70CQ3 517 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 ABI3BPQ7Z7G0 1075 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 GPR65Q8IYL9 337 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 MRPL43Q8N983 215 aaKnown RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 PLA2G15Q8NCC3 412 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 SPPL3Q8TCT6 385 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 GEMIN6Q8WXD5 167 aaKnown RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 MSANTD3Q96H12 275 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 FRG2BQ96QU4 278 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 NT5DC2Q9H857 520 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 NMNAT1Q9HAN9 279 aaPredicted RBP11.31□□□□□ -0.6
LTBR-203ENST00000441074 C11orf16Q9NQ32 467 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 LATS2Q9NRM7 1088 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 KCTD5Q9NXV2 234 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
LTBR-203ENST00000441074 QSOX1O00391 747 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 STK25O00506 426 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 EVX1P49640 407 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CTAG1AP78358 180 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 SNTA1Q13424 505 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 GALEQ14376 348 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 NFE2L1Q14494 772 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 P2RY14Q15391 338 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 GRK1Q15835 563 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 AANATQ16613 207 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 PLK5Q496M5 336 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ZNF770Q6IQ21 691 aaPredicted RBP11.3□□□□□ -0.6
LTBR-203ENST00000441074 PAQR6Q6TCH4 344 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 PLEKHM3Q6ZWE6 761 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 CDH24Q86UP0 819 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 COMMD7Q86VX2 200 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 ZNF366Q8N895 744 aa11.3□□□□□ -0.6
LTBR-203ENST00000441074 SP7Q8TDD2 431 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms