RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ACBD4Q8NC06 268 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 C7orf57Q8NEG2 295 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 OR2A1Q8NGT9 310 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 OR6P1Q8NGX9 317 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 LILRB4Q8NHJ6 448 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 PSMF1Q92530 271 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 RNF31Q96EP0 1072 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 APOPT1Q96IL0 206 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 FAR2Q96K12 515 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 IMMP1LQ96LU5 166 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 FAM111AQ96PZ2 611 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 HAUS8Q9BT25 410 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 MECRQ9BV79 373 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 SHCBP1LQ9BZQ2 653 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 ZNF160Q9HCG1 818 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 INTS10Q9NVR2 710 aaKnown RBP5.67□□□□□ -1.5
PTPRR-204ENST00000440835 CTSFQ9UBX1 484 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 RIMS3Q9UJD0 308 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 PACSIN3Q9UKS6 424 aa5.67□□□□□ -1.5
PTPRR-204ENST00000440835 IDSB3KWA1 339 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 H3BNH8 94 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ALOX12BO75342 701 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 FAM155BO75949 473 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 KLHL18O94889 574 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 H6PDO95479 791 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 AGR2O95994 175 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 TPH1P17752 444 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 AQP5P55064 265 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 RPS15AP62244 130 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 PRDX1Q06830 199 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 VWA2Q5GFL6 755 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 NDUFAF5Q5TEU4 345 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ZNF425Q6IV72 752 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 TIFABQ6ZNK6 161 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 KIAA0408Q6ZU52 694 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 PAQR7Q86WK9 346 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 LURAP1Q96LR2 239 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 TREX2Q9BQ50 279 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 WDR83Q9BRX9 315 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 NUF2Q9BZD4 464 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 C20orf27Q9GZN8 174 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 SOX17Q9H6I2 414 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 RPF2Q9H7B2 306 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ZBTB20Q9HC78 741 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 MRPS30Q9NP92 439 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 TREX1Q9NSU2 369 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 IFT52Q9Y366 437 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 PCDHGA11Q9Y5H2 935 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CACNA1DQ01668 2161 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 A0A1W2PPV9 198 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 C7orf72A4D263 438 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ASPDHA6ND91 283 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 H3BMQ9 156 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CLOCKO15516 846 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 PRMT3O60678 531 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ZG16O60844 167 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CTSVO60911 334 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 GLRA3O75311 464 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 NSA2O95478 260 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 NKX2-5P52952 324 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 SLC12A2P55011 1212 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CRADDP78560 199 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 MPP1Q00013 466 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 OLIG2Q13516 323 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 OXA1LQ15070 435 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 PCOLCEQ15113 449 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 MEP1AQ16819 746 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 LSM12Q3MHD2 195 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 FAM69BQ5VUD6 431 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ANKRD26P1Q6NSI1 321 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 BTLAQ7Z6A9 289 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 IGFN1Q86VF2 1251 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ARHGEF39Q8N4T4 335 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CSNK1A1LQ8N752 337 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 GOLM1Q8NBJ4 401 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 SCMH1Q96GD3 660 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 C10orf90Q96M02 699 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 OR1F2PQ96R84 312 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 OLFM1Q99784 485 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 PSD2Q9BQI7 771 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 NAA50Q9GZZ1 169 aaKnown RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 TRIM45Q9H8W5 580 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 COPS7BQ9H9Q2 264 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 MMP25Q9NPA2 562 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 SMYD2Q9NRG4 433 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 TMEM184CQ9NVA4 438 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 DCDC2Q9UHG0 476 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 NCOA6Q14686 2063 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 H0YGG7 62 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CCL22O00626 93 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 OR1I1O60431 355 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 SERPINA6P08185 405 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 CD46P15529 392 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 JAK1P23458 1154 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 COL8A1P27658 744 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 HTR1EP28566 365 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 EPHA3P29320 983 aa5.66□□□□□ -1.5
PTPRR-204ENST00000440835 ADSLP30566 484 aaPredicted RBP5.66□□□□□ -1.5
PTPRR-204ENST00000440835 OR1D4P47884 311 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms