RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 SUV39H2Q9H5I1 410 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 ELAC1Q9H777 363 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 RYDENQ9NUL5 291 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 DUS2Q9NX74 493 aaKnown RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 VSX1Q9NZR4 365 aaPredicted RBP6.11□□□□□ -1.43
BDNF-211ENST00000439476 SLAMF8Q9P0V8 285 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 MLXQ9UH92 298 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 PCTPQ9UKL6 214 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
BDNF-211ENST00000439476 OR6C70A6NIJ9 312 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PLD2O14939 933 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 AOC2O75106 756 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PTP4A3O75365 173 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLITRK5O94991 958 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 IL3P08700 152 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 STOMP27105 288 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PRDX3P30048 256 aaKnown RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 BMPR1AP36894 532 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 GPLD1P80108 840 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PLEKHN1Q494U1 663 aaPredicted RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 FAM76BQ5HYJ3 339 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 MAMDC4Q6UXC1 1216 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 RGL4Q8IZJ4 473 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 FUBP1Q96AE4 644 aaKnown RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 TMEM80Q96HE8 168 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 FRMD6Q96NE9 622 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLC35A5Q9BS91 424 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 KCNH6Q9H252 994 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 OR51B5Q9H339 312 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SERINC1Q9NRX5 453 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ABI3Q9P2A4 366 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D24Q9ULP9 559 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 FZD4Q9ULV1 537 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 A0A1B0GVC2 190 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 TMEM150CB9EJG8 249 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PRAMEF11O60813 436 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PRSS56P0CW18 603 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 HK1P19367 917 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 MAOBP27338 520 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 GALNSP34059 522 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 OR3A2P47893 321 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SUOXP51687 545 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ERVPABLB-1P60509 514 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ACTC1P68032 377 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ACTA1P68133 377 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.1□□□□□ -1.43
BDNF-211ENST00000439476 PRAMEF14Q5SWL7 426 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 C1orf185Q5T7R7 199 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PRAMEF13Q5VWM6 474 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 TPRG1Q6ZUI0 275 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLC44A3Q8N4M1 653 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 OR10G6Q8NH81 332 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 C1orf216Q8TAB5 229 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ZNF675Q8TD23 568 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLCO4A1Q96BD0 722 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 MYOCQ99972 504 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLC6A15Q9H2J7 730 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 C14orf119Q9NWQ9 140 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 INTS6Q9UL03 887 aaKnown RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 USP22Q9UPT9 525 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 FCF1Q9Y324 198 aaKnown RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 NHSQ6T4R5 1651 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SMCHD1A6NHR9 2005 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 A0A096LPI6 279 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ZNF670-ZNF695F2Z2N8 137 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 NDUFA2O43678 99 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 APOL3O95236 402 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 C1QAP02745 245 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ALPLP05186 524 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 GJA1P17302 382 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PVALBP20472 110 aaPredicted RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 CD40LGP29965 261 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 UGT2B10P36537 528 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 CLCN7P51798 805 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 EMX1Q04741 257 aaPredicted RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 RING1Q06587 406 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 ST3GAL4Q11206 333 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 PPIGQ13427 754 aaKnown RBP eCLIP6.1□□□□□ -1.43
BDNF-211ENST00000439476 SEC23BQ15437 767 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 TOR2AQ5JU69 321 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 LIPJQ5W064 366 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLC30A6Q6NXT4 461 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 NCEH1Q6PIU2 408 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 SLC36A4Q6YBV0 504 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 MCEMP1Q8IX19 187 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 NPAS3Q8IXF0 933 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 DCAF4L2Q8NA75 395 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 CHST4Q8NCG5 386 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 OR6S1Q8NH40 331 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 BBS10Q8TAM1 723 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 OTUB2Q96DC9 234 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 LRIG1Q96JA1 1093 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 UBXN10Q96LJ8 280 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 VRK1Q99986 396 aaPredicted RBP6.1□□□□□ -1.43
BDNF-211ENST00000439476 TNKS2Q9H2K2 1166 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 GORASP2Q9H8Y8 452 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 TBC1D17Q9HA65 648 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 TPT1P8Q9HAU6 139 aa6.1□□□□□ -1.43
BDNF-211ENST00000439476 MRPS30Q9NP92 439 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms