RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 XKP51811 444 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 ALDH6A1Q02252 535 aaKnown RBP22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 ZNF267Q14586 743 aaPredicted RBP22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 MPEG1Q2M385 716 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 SLC48A1Q6P1K1 146 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 GFRALQ6UXV0 394 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 RNF111Q6ZNA4 994 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 C16orf47Q6ZP98 133 aaPredicted RBP22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 DGAT2L6Q6ZPD8 337 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 SLC29A4Q7RTT9 530 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 C10orf107Q8IVU9 208 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 POGLUT1Q8NBL1 392 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 SSC4DQ8WTU2 575 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 TM4SF18Q96CE8 201 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 TRMOQ9BU70 441 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 SEC14L3Q9UDX4 400 aa22.94■■□□□ 1.26
RAPGEF1-206ENST00000438647 OR6C76A6NM76 312 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 KLRC4-KLRK1H3BQV0 150 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 PCDH7O60245 1069 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 TRIM13O60858 407 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 CHN1P15882 459 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 MST1P26927 711 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 HMGCS1Q01581 520 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 PCLAFQ15004 111 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 IMPG1Q17R60 797 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 FAM219BQ5XKK7 198 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 OPN5Q6U736 354 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 HOMEZQ8IX15 550 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 GALNT12Q8IXK2 581 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 UCN3Q969E3 161 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 SENP1Q9P0U3 644 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 OSGIN2Q9Y236 505 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 ZGRF1Q86YA3 2104 aa22.93■■□□□ 1.26
RAPGEF1-206ENST00000438647 GNG14A0A1W2PPG7 69 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 HRKO00198 91 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 UNC5CO95185 931 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 UROSP10746 265 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 CPMP14384 443 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 PORP16435 677 aaPredicted RBP22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 SOX3P41225 446 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 GSTM5P46439 218 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 FOXA1P55317 472 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 RBPJQ06330 500 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 KRTCAP3Q53RY4 240 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 IL20RBQ6UXL0 311 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 C9orf40Q8IXQ3 194 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 SLC22A8Q8TCC7 542 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 SREK1Q8WXA9 508 aaKnown RBP22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 FAM111AQ96PZ2 611 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 CXorf21Q9HAI6 301 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 CES1P1Q9UKY3 287 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 PTPN13Q12923 2485 aa22.92■■□□□ 1.26
RAPGEF1-206ENST00000438647 OR6B1O95007 311 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 ZNF24P17028 368 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 TIA1P31483 386 aaKnown RBP eCLIP22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 ALDH9A1P49189 494 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 KRT71Q3SY84 523 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 C4orf17Q53FE4 359 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 PIGGQ5H8A4 983 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 SPDYAQ5MJ70 313 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 GALNT18Q6P9A2 607 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 MDGA2Q7Z553 956 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 CPSF7Q8N684 471 aaKnown RBP22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 PSD4Q8NDX1 1056 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 APIPQ96GX9 242 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 SGCZQ96LD1 299 aa22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 ERRFI1Q9UJM3 462 aaPredicted RBP22.91■■□□□ 1.26
RAPGEF1-206ENST00000438647 ERAL1O75616 437 aaKnown RBP22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 STSP08842 583 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 DRD2P14416 443 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 CSNK2A2P19784 350 aaPredicted RBP22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 NT5EP21589 574 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 MEOX1P50221 254 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 SLC37A1P57057 533 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 KCNK10P57789 538 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 HEPACAMQ14CZ8 416 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 SCIMPQ6UWF3 145 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 RTL4Q6ZR62 310 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 TRIM46Q7Z4K8 759 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 SULF2Q8IWU5 870 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 SLC15A4Q8N697 577 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 GOLM1Q8NBJ4 401 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 TCP10LQ8TDR4 215 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 KLHL29Q96CT2 875 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 GPR137Q96N19 417 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 GAL3ST4Q96RP7 486 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 GATA5Q9BWX5 397 aaPredicted RBP22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 RRAGDQ9NQL2 400 aaPredicted RBP22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 SIRT5Q9NXA8 310 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 ZNF780BQ9Y6R6 833 aa22.9■■□□□ 1.26
RAPGEF1-206ENST00000438647 PEX1O43933 1283 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 SPAG7O75391 227 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 PER3P56645 1201 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 RAE1P78406 368 aaKnown RBP22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 BTKQ06187 659 aa22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 DND1Q8IYX4 353 aaKnown RBP22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 SAMD14Q8IZD0 417 aaPredicted RBP22.89■■□□□ 1.25
RAPGEF1-206ENST00000438647 DOK4Q8TEW6 326 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms