RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 STAMBPL1Q96FJ0 436 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CERS2Q96G23 380 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SNF8Q96H20 258 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SENP5Q96HI0 755 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PPP1R16AQ96I34 528 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SERAC1Q96JX3 654 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPR137Q96N19 417 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 VPS35Q96QK1 796 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CBWD1Q9BRT8 395 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 WRAP53Q9BUR4 548 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 HIPK2Q9H2X6 1198 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 DPEP2Q9H4A9 486 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ELOVL6Q9H5J4 265 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZDHHC6Q9H6R6 413 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ELOVL3Q9HB03 270 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCNB1IP1Q9NPC3 277 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 DMAP1Q9NPF5 467 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MRPL40Q9NQ50 206 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ABHD10Q9NUJ1 306 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 MED17Q9NVC6 651 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SMOXQ9NWM0 555 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SPHK1Q9NYA1 384 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 PTTG3PQ9NZH4 202 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 GRHL1Q9NZI5 618 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 SIX4Q9UIU6 781 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 CCNL1Q9UK58 526 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADAM21Q9UKJ8 722 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ADAM28Q9UKQ2 775 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 ABT1Q9ULW3 272 aaKnown RBP3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 NFE2L3Q9Y4A8 694 aa3.37□□□□□ -1.87
HMGB1P12-201ENST00000438594 FHOD3Q2V2M9 1422 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLB1Q6P1J6 1458 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 A0A1W2PPK0 400 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 GSTTP1A0A1W2PQM5 241 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TCRBV7S3A2A0A539 114 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 RNF222A6NCQ9 220 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 FBLL1A6NHQ2 334 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR6C70A6NIJ9 312 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 GOLGA8KD6RF30 607 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PRSS46E5RG02 174 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLCO1B7G3V0H7 640 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MS4A18H0YCH9 400 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 AP4M1O00189 453 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 P2RY10O00398 339 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 VCYO14598 125 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZSCAN12O43309 604 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PLPP2O43688 288 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR1F1O43749 312 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TIMM8AO60220 97 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 OR10H2O60403 315 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 GPX5O75715 221 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMCC1O94876 653 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 BRI3O95415 125 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 H6PDO95479 791 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZBTB11O95625 1053 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NFATC1O95644 943 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CPNE6O95741 557 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TSPAN12O95859 305 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CST1P01037 141 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ERCC1P07992 297 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NCK1P16333 377 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MSNP26038 577 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MAGEA9P43362 315 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MAGEA11P43364 429 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SLC6A8P48029 635 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 KCNJ4P48050 445 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CASP4P49662 377 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NUMBP49757 651 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NUDT6P53370 316 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MAPK12P53778 367 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 IST1P53990 364 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ATP5J2P56134 94 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 P2RX3P56373 397 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NLRP11P59045 1033 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PRPS1P60891 318 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 PPIAP62937 165 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 RHAGQ02094 409 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 GAB1Q13480 694 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 MICBQ29980 383 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SGSM1Q2NKQ1 1148 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 C18orf21Q32NC0 220 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ITPRIPL2Q3MIP1 535 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 DNAL1Q4LDG9 190 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SBK1Q52WX2 424 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SFRP4Q6FHJ7 346 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SNRNP48Q6IEG0 339 aaKnown RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ZNF770Q6IQ21 691 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 FAM166AQ6J272 317 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM71Q6P5X7 295 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CD164L2Q6UWJ8 174 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 ASCL4Q6XD76 172 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 HSDL2Q6YN16 418 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NLRP9Q7RTR0 991 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 SCD5Q86SK9 330 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CBWD2Q8IUF1 395 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 CNGA4Q8IV77 575 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 TMEM123Q8N131 208 aa3.36□□□□□ -1.87
HMGB1P12-201ENST00000438594 NAGSQ8N159 534 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms