RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SAP18O00422 153 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 RTCAO00442 366 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 AQP7O14520 342 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 EIF3HO15372 352 aaKnown RBP eCLIP7.17□□□□□ -1.26
VPS50-204ENST00000438395 TAPBPO15533 448 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SUSD5O60279 629 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 HCN1O60741 890 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 TOXO94900 526 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 TGFB1P01137 390 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 HOXD4P09016 255 aaPredicted RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 GSTA2P09210 222 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 GFAPP14136 432 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 GABRA1P14867 456 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 CD1DP15813 335 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 CRABP2P29373 138 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SERPINB3P29508 390 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 STX2P32856 288 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 STT3AP46977 705 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 ZFP36L2P47974 494 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 DNASE1L1P49184 302 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 ART1P52961 327 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 KRTAP10-9P60411 292 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 BIKQ13323 160 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 OR4D1Q15615 310 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 MPEG1Q2M385 716 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SLC25A35Q3KQZ1 300 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 C1orf185Q5T7R7 199 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 KHDRBS2Q5VWX1 349 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 FBXW10Q5XX13 1052 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 HLA-DQA1Q5Y7H0 255 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SLC22A10Q63ZE4 541 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 ADNP2Q6IQ32 1131 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 KLC3Q6P597 504 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 CYP20A1Q6UW02 462 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SPNS3Q6ZMD2 512 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 RNF111Q6ZNA4 994 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 TRILQ7L0X0 811 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 VN1R5Q7Z5H4 357 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 WDR53Q7Z5U6 358 aaPredicted RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 GPR180Q86V85 440 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 CREG2Q8IUH2 290 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 TAGAPQ8N103 731 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 Q8N3U1 123 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 PPM1NQ8N819 430 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 NUBPLQ8TB37 319 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 RGMAQ96B86 450 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SPACA9Q96E40 222 aaPredicted RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 WDR34Q96EX3 536 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SENP5Q96HI0 755 aaPredicted RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 FBXL20Q96IG2 436 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 JSRP1Q96MG2 331 aaPredicted RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 RPF2Q9H7B2 306 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 ACTR8Q9H981 624 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 SMYD2Q9NRG4 433 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 LYARQ9NX58 379 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 CNIH4Q9P003 139 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 WHRNQ9P202 907 aa7.17□□□□□ -1.26
VPS50-204ENST00000438395 PTBP2Q9UKA9 531 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 INTS1Q8N201 2190 aaKnown RBP7.17□□□□□ -1.26
VPS50-204ENST00000438395 NCOA6Q14686 2063 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 ABCA4P78363 2273 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 AKAP6Q13023 2319 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 C15orf38-AP3S2A0A0A6YYH1 394 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 PINLYPA6NC86 204 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 FAM159BA6NKW6 160 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 DVL2O14641 736 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TP53I11O14683 189 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 FGF17O60258 216 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 KERAO60938 352 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 GLSO94925 669 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 IGHG3P01860 377 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 LTA4HP09960 611 aaKnown RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 CCL3P10147 92 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 NR2F6P10588 404 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 ALOX15P16050 662 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 IGFBP2P18065 325 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 KRT15P19012 456 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 CD22P20273 847 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 GDF1P27539 372 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 SSTR1P30872 391 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 UQCRC1P31930 480 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 GCKP35557 465 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 PIGAP37287 484 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 PEX19P40855 299 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 PIK3CGP48736 1102 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 MASP1P48740 699 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 TMED10P49755 219 aaKnown RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 RPP38P78345 283 aaKnown RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 TNFRSF17Q02223 184 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 CAV1Q03135 178 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 FOLH1Q04609 750 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 SLAMF1Q13291 335 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 NAB1Q13506 487 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 SF3B4Q15427 424 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS50-204ENST00000438395 ZKSCAN8Q15776 578 aaPredicted RBP7.16□□□□□ -1.26
VPS50-204ENST00000438395 FAM83EQ2M2I3 478 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 EMC4Q5J8M3 183 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 GRTP1Q5TC63 336 aa7.16□□□□□ -1.26
VPS50-204ENST00000438395 PRAMEF20Q5VT98 475 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms