RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ZDHHC12Q96GR4 267 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 PDGFDQ9GZP0 370 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-209ENST00000437951 FZD3Q9NPG1 666 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 A0A1W2PQH9 124 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 MEIOCA2RUB1 952 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 JUNP05412 331 aaKnown RBP11.08□□□□□ -0.64
PTCH1-209ENST00000437951 GGT1P19440 569 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 PRSS3P35030 304 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 GAD2Q05329 585 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 COTL1Q14019 142 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 PRAMEF14Q5SWL7 426 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 ADAM19Q9H013 955 aa11.08□□□□□ -0.64
PTCH1-209ENST00000437951 H3BMQ9 156 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 KHNYNO15037 678 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SERPINA7P05543 415 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 DSC2Q02487 901 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF763Q0D2J5 394 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 FNDC9Q8TBE3 224 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 NT5C3BQ969T7 300 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 COG8Q96MW5 612 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TTYH3Q9C0H2 523 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TNFRSF10AO00220 468 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 NKX2-5P52952 324 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 UFM1P61960 85 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SLBPQ14493 270 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 GPR19Q15760 415 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 CCNJQ5T5M9 372 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 RBMS3Q6XE24 437 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 C12orf29Q8N999 325 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 KIAA1191Q96A73 305 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 CENPOQ9BU64 300 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 FN3KRPQ9HA64 309 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ACP6Q9NPH0 428 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF223Q9UK11 482 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 MYO5BQ9ULV0 1848 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 GNB3P16520 340 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ADH7P40394 386 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 BMXP51813 675 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 OR4F3Q6IEY1 312 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PAPD5Q8NDF8 572 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SRA1Q9HD15 236 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ADAP2Q9NPF8 381 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SACM1LQ9NTJ5 587 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SALL3Q9BXA9 1300 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3DA0A087WVF3 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3IA0A087WXS9 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3EA0A087X179 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3KA0A087X1G2 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3FA6NER0 549 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 C2CD4BA6NLJ0 364 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3LB9A6J9 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 JRKO75564 520 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PCCBP05166 539 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3HP0C7X1 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 RNF151Q2KHN1 245 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3GQ6DHY5 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3CQ6IPX1 549 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 LCN8Q6JVE9 175 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TMEM150AQ86TG1 271 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TMEM173Q86WV6 379 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TBC1D3Q8IZP1 549 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PLPP5Q8NEB5 264 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 JSRP1Q96MG2 331 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 OR2AG1Q9H205 316 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SIRPGQ9P1W8 387 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 RFXAPO00287 272 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ALDOBP05062 364 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 RFC2P35250 354 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TLE4Q04727 773 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SLAMF1Q13291 335 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PMS2P3Q13401 168 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PCLAFQ15004 111 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 NANOGP8Q6NSW7 305 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TMEM220Q6QAJ8 160 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF783Q6ZMS7 281 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TRMT10AQ8TBZ6 339 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 NANOGQ9H9S0 305 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 TEX264Q9Y6I9 313 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 A0A1B0GVT2 93 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 A6NHS1 94 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 NFATC1O95644 943 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 C4BPAP04003 597 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 AQP2P41181 271 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 FKBP1CQ5VVH2 108 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 UBE2UQ5VVX9 321 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF695Q8IW36 515 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SLC7A5P1Q8MH63 180 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PLA2G15Q8NCC3 412 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 SFXN5Q8TD22 340 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 UPRTQ96BW1 309 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF382Q96SR6 550 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 POLDIP3Q9BY77 421 aaKnown RBP11.07□□□□□ -0.64
PTCH1-209ENST00000437951 UBIAD1Q9Y5Z9 338 aa11.07□□□□□ -0.64
PTCH1-209ENST00000437951 PPP1R2P9O14990 202 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms