RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 ZNF225Q9UK10 706 aa16.51■□□□□ 0.23
CPNE1-213ENST00000434795 ADAM29Q9UKF5 820 aa16.51■□□□□ 0.23
CPNE1-213ENST00000434795 A0A1W2PS29 197 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 A8MT66 165 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 FAM166BA8MTA8 275 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 CLDN14O95500 239 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 CCL3P10147 92 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 TSPAN8P19075 237 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 ARL1P40616 181 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-213ENST00000434795 HERVK_113P63132 956 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 ERVK-8P63133 956 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 PLGLB1Q02325 96 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 IFT88Q13099 833 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 HYAL4Q2M3T9 481 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 NDUFAF5Q5TEU4 345 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 SLC22A10Q63ZE4 541 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-213ENST00000434795 ARHGAP11AQ6P4F7 1023 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 PAOXQ6QHF9 649 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 TRMT10CQ7L0Y3 403 aaKnown RBP16.5■□□□□ 0.23
CPNE1-213ENST00000434795 MCEMP1Q8IX19 187 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 CEP112Q8N8E3 955 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 CNPPD1Q9BV87 410 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 ERVK-6Q9BXR3 956 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 MRPL1Q9BYD6 325 aaKnown RBP16.5■□□□□ 0.23
CPNE1-213ENST00000434795 TXLNGYQ9BZA5 131 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 RUBCNLQ9H714 662 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 CXorf21Q9HAI6 301 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 IL1RL2Q9HB29 575 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.5■□□□□ 0.239e-7■□□□□ 11
CPNE1-213ENST00000434795 TEX10Q9NXF1 929 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-213ENST00000434795 TMEM216Q9P0N5 145 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 ERVK-19Q9WJR5 959 aa16.5■□□□□ 0.23
CPNE1-213ENST00000434795 NCOA6Q14686 2063 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-213ENST00000434795 DCHS2Q6V1P9 2916 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 A0A1B0GVC2 190 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 EXOC1LA0A1B0GW35 172 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 C19orf84I3L1E1 186 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 RIPK2O43353 540 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 OR10H2O60403 315 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 OTCP00480 354 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 PDYNP01213 254 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 IGHG3P01860 377 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 P04436 131 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 TPOP07202 933 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 FAM153BP0C7A2 387 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 FBN2P35556 2912 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 PIGAP37287 484 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 KIR3DL1P43629 444 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 DNASE1L1P49184 302 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 XKP51811 444 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 FAM153CQ494X1 144 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 GXYLT1Q4G148 440 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 UNC50Q53HI1 259 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 CCNYL2Q5T2Q4 361 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 LETMD1Q6P1Q0 360 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 GK5Q6ZS86 529 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 FAM47EQ6ZV65 393 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 SLC22A16Q86VW1 577 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 SRRM1Q8IYB3 904 aaKnown RBP16.49■□□□□ 0.23
CPNE1-213ENST00000434795 EID3Q8N140 333 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 MARVELD2Q8N4S9 558 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 TMEM251Q8N6I4 163 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 OR4K14Q8NGD5 310 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 PAQR8Q8TEZ7 354 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 WWTR1Q9GZV5 400 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 ELOVL6Q9H5J4 265 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 PROK2Q9HC23 129 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 RYDENQ9NUL5 291 aaKnown RBP16.49■□□□□ 0.23
CPNE1-213ENST00000434795 TUBA8Q9NY65 449 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-213ENST00000434795 CES1P1Q9UKY3 287 aa16.49■□□□□ 0.23
CPNE1-213ENST00000434795 ADGRG4Q8IZF6 3080 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 CSMD1Q96PZ7 3565 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 OR6C76A6NM76 312 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 DLX3O60479 287 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 FBXO45P0C2W1 286 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 S1PR1P21453 382 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 PIK3R1P27986 724 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 CLCQ05315 142 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 GALNT1Q10472 559 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-213ENST00000434795 FUT7Q11130 342 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 TBL3Q12788 808 aaKnown RBP16.48■□□□□ 0.23
CPNE1-213ENST00000434795 SLC29A2Q14542 456 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 TEX35Q5T0J7 233 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 FAM219BQ5XKK7 198 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 OR52E8Q6IFG1 317 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 RNF111Q6ZNA4 994 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 SLC29A4Q7RTT9 530 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 CD163Q86VB7 1156 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 ZNF615Q8N8J6 731 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 ZNF441Q8N8Z8 693 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 SLC22A8Q8TCC7 542 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 TM4SF18Q96CE8 201 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 SPACA9Q96E40 222 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-213ENST00000434795 TACC2O95359 2948 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 PKDREJQ9NTG1 2253 aa16.48■□□□□ 0.23
CPNE1-213ENST00000434795 ZNF407Q9C0G0 2248 aa16.47■□□□□ 0.23
CPNE1-213ENST00000434795 ACOT7O00154 380 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms