RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MFSD4BQ5TF39 518 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 CPZQ66K79 652 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 C6orf15Q6UXA7 325 aaPredicted RBP24.83■■□□□ 1.56
TMEM248-205ENST00000433271 MSRB3Q8IXL7 192 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 TRIML2Q8N7C3 387 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 PTCHD1Q96NR3 888 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 ALOXE3Q9BYJ1 711 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 CHST8Q9H2A9 424 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 FOXJ2Q9P0K8 574 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 NEUROG3Q9Y4Z2 214 aa24.83■■□□□ 1.56
TMEM248-205ENST00000433271 PTPRBP23467 1997 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 TGFBR3LH3BV60 316 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 SLC6A2P23975 617 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 GABREP78334 506 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 RHAGQ02094 409 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 SERTAD2Q14140 314 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 NKG7Q16617 165 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 GTDC1Q4AE62 458 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 MLIPQ5VWP3 458 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 NANOGP8Q6NSW7 305 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 MRPL14Q6P1L8 145 aaKnown RBP24.82■■□□□ 1.56
TMEM248-205ENST00000433271 LAPTM4BQ86VI4 370 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 SLC46A1Q96NT5 459 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 ANKRD27Q96NW4 1050 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 TRIM4Q9C037 500 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 WDR54Q9H977 334 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 NANOGQ9H9S0 305 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.82■■□□□ 1.56
TMEM248-205ENST00000433271 PADI1Q9ULC6 663 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 MKL2Q9ULH7 1088 aa24.82■■□□□ 1.56
TMEM248-205ENST00000433271 TEX51A0A1B0GUA7 166 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 GSC2O15499 205 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 CCNYL3P0C7X3 344 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 GPC1P35052 558 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 RUNDC3AQ59EK9 446 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 FAM199XQ6PEV8 388 aaPredicted RBP24.81■■□□□ 1.56
TMEM248-205ENST00000433271 PRSS58Q8IYP2 241 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 ST13P4Q8IZP2 240 aaPredicted RBP24.81■■□□□ 1.56
TMEM248-205ENST00000433271 KIF2BQ8N4N8 673 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 OR9A2Q8NGT5 310 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 VN1R1Q9GZP7 353 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 CXorf36Q9H7Y0 433 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 SPAG4Q9NPE6 437 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 NECTIN3Q9NQS3 549 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 SEMA3GQ9NS98 782 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 SIRT3Q9NTG7 399 aaPredicted RBP24.81■■□□□ 1.56
TMEM248-205ENST00000433271 GPN3Q9UHW5 284 aaPredicted RBP24.81■■□□□ 1.56
TMEM248-205ENST00000433271 SNX8Q9Y5X2 465 aa24.81■■□□□ 1.56
TMEM248-205ENST00000433271 IGKV3D-11A0A0A0MRZ8 115 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 C15orf38-AP3S2A0A0A6YYH1 394 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 C9J4A7 227 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 DNAJC8O75937 253 aaPredicted RBP24.8■■□□□ 1.56
TMEM248-205ENST00000433271 RECKO95980 971 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 CDK9P50750 372 aaKnown RBP24.8■■□□□ 1.56
TMEM248-205ENST00000433271 ARPINQ7Z6K5 226 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 PLPP5Q8NEB5 264 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 OR8J3Q8NGG0 315 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 RBM18Q96H35 190 aaKnown RBP24.8■■□□□ 1.56
TMEM248-205ENST00000433271 SH3GL1Q99961 368 aa24.8■■□□□ 1.56
TMEM248-205ENST00000433271 CADM1Q9BY67 442 aaKnown RBP24.8■■□□□ 1.56
TMEM248-205ENST00000433271 NXT1Q9UKK6 140 aaKnown RBP24.8■■□□□ 1.56
TMEM248-205ENST00000433271 MYOCOSA0A1B0GUC4 107 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 UQCRC2P22695 453 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 GAB1Q13480 694 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 FAM198BQ6UWH4 519 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 TIPARPQ7Z3E1 657 aaKnown RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 GMEB1Q9Y692 573 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 PIEZO1Q92508 2521 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 NUP210LQ5VU65 1888 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 OR10H2O60403 315 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 CNOT3O75175 753 aaKnown RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 RBMS1P29558 406 aaKnown RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 STT3AP46977 705 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 MAP7Q14244 749 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 BNC2Q6ZN30 1099 aaPredicted RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 SLC15A3Q8IY34 581 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 ADCY4Q8NFM4 1077 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 ELP4Q96EB1 424 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 AURKBQ96GD4 344 aaPredicted RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 CDRT15Q96T59 188 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 SPSB2Q99619 263 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 PELOQ9BRX2 385 aaKnown RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 TMEM181Q9P2C4 612 aa24.79■■□□□ 1.56
TMEM248-205ENST00000433271 PRPF19Q9UMS4 504 aaKnown RBP24.79■■□□□ 1.56
TMEM248-205ENST00000433271 SYNDIG1LA6NDD5 238 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 SLITRK5O94991 958 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 PTGER1P34995 402 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 SLC7A2P52569 658 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 EFNA3P52797 238 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 NCF4Q15080 339 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 LTB4RQ15722 352 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 NSDHLQ15738 373 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 RABL3Q5HYI8 236 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 IGF2-ASQ6U949 168 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 TMEM64Q6YI46 380 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 SHISA6Q6ZSJ9 500 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 ZNF675Q8TD23 568 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 ZFP90Q8TF47 636 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 MCUR1Q96AQ8 359 aa24.78■■□□□ 1.56
TMEM248-205ENST00000433271 PPWD1Q96BP3 646 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms