RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 GRM7Q14831 915 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 TMEM35AQ53FP2 167 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SFT2D3Q587I9 215 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 ARHGAP40Q5TG30 622 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 PAGE2Q7Z2X7 111 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 RP1L1Q8IWN7 2480 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 AGBL5Q8NDL9 886 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR6C4Q8NGE1 309 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 MAGEB10Q96LZ2 347 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 CD180Q99467 661 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC25A23Q9BV35 468 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 KLHL4Q9C0H6 718 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 CHST8Q9H2A9 424 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 AHSPQ9NZD4 102 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 DTX4Q9Y2E6 619 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 KCNE3Q9Y6H6 103 aa8.94□□□□□ -0.98
HMGCLL1-206ENST00000428842 JMJD7P0C870 316 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 UQCRBP14927 111 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 F8A1P23610 371 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 MANFP55145 182 aaKnown RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 PSME3P61289 254 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 TNFRSF17Q02223 184 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 MAD2L1Q13257 205 aaPredicted RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 HERC3Q15034 1050 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC48A1Q6P1K1 146 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 TNFAIP8L2Q6P589 184 aaPredicted RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 RNF165Q6ZSG1 346 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR10A6Q8NH74 314 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ANKRD9Q96BM1 317 aaPredicted RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 GBP5Q96PP8 586 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SERINC2Q96SA4 455 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZBTB18Q99592 522 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 EHD3Q9NZN3 535 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SEMA5BQ9P283 1151 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 TSC22D4Q9Y3Q8 395 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZFYVE26Q68DK2 2539 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 A0A1W2PRB8 838 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 CDC14CA4D256 554 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 MEN1O00255 615 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 MT-ND1P03886 318 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 GP1BAP07359 652 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 CELA2AP08217 269 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ETFAP13804 333 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SSTR4P31391 388 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 TP53BP2Q13625 1128 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 PDE7AQ13946 482 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 HEPACAMQ14CZ8 416 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 INAVAQ3KP66 663 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 NKAIN1Q4KMZ8 207 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ATP1A1-AS1Q5TC04 95 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 OGFRL1Q5TC84 451 aaPredicted RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 LPCAT4Q643R3 524 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 C16orf89Q6UX73 402 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC15A3Q8IY34 581 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR7G2Q8NG99 324 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 THAP3Q8WTV1 239 aaPredicted RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZNF681Q96N22 645 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 PTCHD1Q96NR3 888 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 AMDHD1Q96NU7 426 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 LMF1Q96S06 567 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 CMKLR1Q99788 373 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 THUMPD3Q9BV44 507 aaKnown RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 NRSN2Q9GZP1 204 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SERHL2Q9H4I8 314 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZNF304Q9HCX3 659 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SLC35C2Q9NQQ7 365 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 PNO1Q9NRX1 252 aaKnown RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 SIRT3Q9NTG7 399 aaPredicted RBP8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 PCDHA9Q9Y5H5 950 aa8.93□□□□□ -0.98
HMGCLL1-206ENST00000428842 PCSK5Q92824 1860 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 FITM1A5D6W6 292 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 ENO4A6NNW6 628 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 PDPK1O15530 556 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 TNFSF15O95150 251 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 BMP10O95393 424 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 PEX2P28328 305 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 MAPK1P28482 360 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 GPC1P35052 558 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 HPCAL1P37235 193 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 GCGRP47871 477 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 RFX3P48380 749 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 OR4D2P58180 307 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 SQSTM1Q13501 440 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 TMEM64Q6YI46 380 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 RNF130Q86XS8 419 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 STT3BQ8TCJ2 826 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 ZFAND2BQ8WV99 257 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 TESCQ96BS2 214 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 COQ8BQ96D53 544 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 BTBD9Q96Q07 612 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 BBS4Q96RK4 519 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 PRRX2Q99811 253 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 PITHD1Q9GZP4 211 aaPredicted RBP8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 EFCAB1Q9HAE3 211 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 LANCL2Q9NS86 450 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 ASIC5Q9NY37 505 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 ADGRE2Q9UHX3 823 aa8.92□□□□□ -0.98
HMGCLL1-206ENST00000428842 DOCK10Q96BY6 2186 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms