RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 WDR41Q9HAD4 459 aa16.03■□□□□ 0.16
DDR1-235ENST00000428153 SEMA4BQ9NPR2 832 aaPredicted RBP16.03■□□□□ 0.16
DDR1-235ENST00000428153 UTP11Q9Y3A2 253 aaKnown RBP16.03■□□□□ 0.16
DDR1-235ENST00000428153 L3MBTL1Q9Y468 752 aa16.03■□□□□ 0.16
DDR1-235ENST00000428153 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
DDR1-235ENST00000428153 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
DDR1-235ENST00000428153 A0A0A6YYD5 115 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 CAPN14A8MX76 684 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 FOXE1O00358 373 aaPredicted RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 ZWINTO95229 277 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 CELA3AP09093 270 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 SLC35E2P0CK97 266 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 ALDH18A1P54886 795 aaKnown RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 HNRNPH2P55795 449 aaKnown RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 MYBPHQ13203 477 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 ACAP2Q15057 778 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.166e-10■■■■■ 41.1
DDR1-235ENST00000428153 C10orf62Q5T681 223 aaPredicted RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 C18orf63Q68DL7 685 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 RNF111Q6ZNA4 994 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 TMEM200AQ86VY9 491 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 CENPLQ8N0S6 344 aaPredicted RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 TAGAPQ8N103 731 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 NEIL3Q8TAT5 605 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 RIT1Q92963 219 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 TP53INP1Q96A56 240 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 PPWD1Q96BP3 646 aaKnown RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 NXNL1Q96CM4 212 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 SECISBP2Q96T21 854 aaKnown RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 MTERF1Q99551 399 aaKnown RBP16.02■□□□□ 0.16
DDR1-235ENST00000428153 EXO5Q9H790 373 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 PROK2Q9HC23 129 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 ASB4Q9Y574 426 aa16.02■□□□□ 0.16
DDR1-235ENST00000428153 ARHGAP21Q5T5U3 1957 aa16.02■□□□□ 0.15
DDR1-235ENST00000428153 NIPBLQ6KC79 2804 aaeCLIP16.01■□□□□ 0.15
DDR1-235ENST00000428153 FAM221AA4D161 298 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 LRRC3CA6NJW4 275 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 HSPB2A8KAH6 182 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 AHRRA9YTQ3 701 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 HRKO00198 91 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 OR10H2O60403 315 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 SH3BGRLO75368 114 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 SEMA3DO95025 777 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 NR2F6P10588 404 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 BSGP35613 385 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 ADH7P40394 386 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 MAGEA4P43358 317 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 PLTPP55058 493 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 RPS13P62277 151 aaKnown RBP16.01■□□□□ 0.15
DDR1-235ENST00000428153 HERVK_113P63132 956 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 ERVK-8P63133 956 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 DDX39BQ13838 428 aaKnown RBP16.01■□□□□ 0.15
DDR1-235ENST00000428153 HSPB2Q16082 182 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 DGAT2L6Q6ZPD8 337 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 ZNF441Q8N8Z8 693 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 L3MBTL4Q8NA19 623 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 OR10G3Q8NGC4 313 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 FBXO25Q8TCJ0 367 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 FBF1Q8TES7 1133 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 CNPPD1Q9BV87 410 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 SORBS1Q9BX66 1292 aaKnown RBP16.01■□□□□ 0.15
DDR1-235ENST00000428153 ERVK-6Q9BXR3 956 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 ACTR8Q9H981 624 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 SNX15Q9NRS6 342 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 SPRR3Q9UBC9 169 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 CNOT11Q9UKZ1 510 aaKnown RBP16.01■□□□□ 0.15
DDR1-235ENST00000428153 ERVK-19Q9WJR5 959 aa16.01■□□□□ 0.15
DDR1-235ENST00000428153 AKAP6Q13023 2319 aa16■□□□□ 0.15
DDR1-235ENST00000428153 NINQ8N4C6 2090 aa16■□□□□ 0.15
DDR1-235ENST00000428153 TP53I11O14683 189 aa16■□□□□ 0.15
DDR1-235ENST00000428153 CDH16O75309 829 aa16■□□□□ 0.15
DDR1-235ENST00000428153 TRIM3O75382 744 aaPredicted RBP16■□□□□ 0.15
DDR1-235ENST00000428153 FAM155BO75949 473 aa16■□□□□ 0.15
DDR1-235ENST00000428153 RFPL3SP0C7P2 107 aa16■□□□□ 0.15
DDR1-235ENST00000428153 FAM58BPP0C7Q3 252 aa16■□□□□ 0.15
DDR1-235ENST00000428153 GFAPP14136 432 aa16■□□□□ 0.15
DDR1-235ENST00000428153 DNAJA1P31689 397 aaKnown RBP16■□□□□ 0.15
DDR1-235ENST00000428153 TMED10P49755 219 aaKnown RBP16■□□□□ 0.15
DDR1-235ENST00000428153 MRPS25P82663 173 aaKnown RBP16■□□□□ 0.15
DDR1-235ENST00000428153 GUCY2DQ02846 1103 aa16■□□□□ 0.15
DDR1-235ENST00000428153 ZNF267Q14586 743 aaPredicted RBP16■□□□□ 0.15
DDR1-235ENST00000428153 RPS6KA2Q15349 733 aa16■□□□□ 0.15
DDR1-235ENST00000428153 SF3B4Q15427 424 aaKnown RBP eCLIP16■□□□□ 0.159e-6■■□□□ 14.4
DDR1-235ENST00000428153 PFKFB4Q16877 469 aa16■□□□□ 0.15
DDR1-235ENST00000428153 KRTAP21-3Q3LHN1 58 aa16■□□□□ 0.15
DDR1-235ENST00000428153 FBXL19-AS1Q494R0 122 aa16■□□□□ 0.15
DDR1-235ENST00000428153 OR52E8Q6IFG1 317 aa16■□□□□ 0.15
DDR1-235ENST00000428153 CYP20A1Q6UW02 462 aa16■□□□□ 0.15
DDR1-235ENST00000428153 ARSKQ6UWY0 536 aa16■□□□□ 0.15
DDR1-235ENST00000428153 NUDT13Q86X67 352 aa16■□□□□ 0.15
DDR1-235ENST00000428153 MYLK4Q86YV6 388 aaPredicted RBP16■□□□□ 0.15
DDR1-235ENST00000428153 LIX1LQ8IVB5 337 aa16■□□□□ 0.15
DDR1-235ENST00000428153 ULK2Q8IYT8 1036 aa16■□□□□ 0.15
DDR1-235ENST00000428153 FAM13CQ8NE31 585 aa16■□□□□ 0.15
DDR1-235ENST00000428153 C17orf47Q8NEP4 570 aa16■□□□□ 0.15
DDR1-235ENST00000428153 WDR20Q8TBZ3 569 aa16■□□□□ 0.15
DDR1-235ENST00000428153 SREK1Q8WXA9 508 aaKnown RBP16■□□□□ 0.15
DDR1-235ENST00000428153 LRRC46Q96FV0 321 aa16■□□□□ 0.15
DDR1-235ENST00000428153 ZNF597Q96LX8 424 aa16■□□□□ 0.15
DDR1-235ENST00000428153 DOHHQ9BU89 302 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms