RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PIK3R1P27986 724 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TMED10P49755 219 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 NAGLUP54802 743 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CDH13P55290 713 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 DCAF7P61962 342 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 RNF4P78317 190 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 FOLH1Q04609 750 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 RBPJQ06330 500 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 ACSM2AQ08AH3 577 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 DDX39BQ13838 428 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 ELOAQ14241 798 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 OR1C1Q15619 314 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 SMU1Q2TAY7 513 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 PIGGQ5H8A4 983 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CFAP157Q5JU67 520 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TBCELQ5QJ74 424 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CCNYL2Q5T2Q4 361 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 FHL5Q5TD97 284 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 NDUFAF5Q5TEU4 345 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 ACSM2BQ68CK6 577 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 EID3Q8N140 333 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CISD2Q8N5K1 135 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 NATD1Q8N6N6 113 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 OR4K14Q8NGD5 310 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 SLC2A12Q8TD20 617 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 EPS8L3Q8TE67 593 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 GRHL3Q8TE85 626 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 NCLNQ969V3 563 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 RELTQ969Z4 430 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 FCRL1Q96LA6 429 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CDK15Q96Q40 435 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 SMC6Q96SB8 1091 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 PARD6BQ9BYG5 372 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 RBCK1Q9BYM8 510 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CDCP1Q9H5V8 836 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 CXorf21Q9HAI6 301 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 EML4Q9HC35 981 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 HHATLQ9HCP6 504 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 TIMMDC1Q9NPL8 285 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 QPCTLQ9NXS2 382 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF639Q9UID6 485 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 SLC12A4Q9UP95 1085 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 PLAAQ9Y263 795 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 PCDHGB3Q9Y5G1 929 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 RELNP78509 3460 aa8.49□□□□□ -1.05
SMC1A-203ENST00000428014 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
SMC1A-203ENST00000428014 A0A0G2JN53 185 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 TRBV11-1A0A0K0K1C0 115 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 A0A1B0GTL3 188 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 OR2W5A6NFC9 320 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 A8MUI8 341 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 CAPN14A8MX76 684 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 MASP2O00187 686 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 BIRC5O15392 142 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ERLIN1O75477 346 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 SOX30O94993 753 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 CHEK2O96017 543 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 IFNA16P05015 189 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 CELA2AP08217 269 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 CPMP14384 443 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 PORP16435 677 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 AGAP20933 346 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 TIA1P31483 386 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ARL1P40616 181 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ETV4P43268 484 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 NEK2P51955 445 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 HK2P52789 917 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 PER3P56645 1201 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 SLC37A1P57057 533 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 PCLAFQ15004 111 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 C4orf17Q53FE4 359 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 Q6ZPB1 254 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 RTL4Q6ZR62 310 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF227Q86WZ6 799 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 GALNT12Q8IXK2 581 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 GSPT2Q8IYD1 628 aaKnown RBP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 TMEM156Q8N614 296 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 CDYL2Q8N8U2 506 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF441Q8N8Z8 693 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ZNF511Q8NB15 262 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 SLC22A8Q8TCC7 542 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 RIT1Q92963 219 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 TM4SF18Q96CE8 201 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 NTNG2Q96CW9 530 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 MTERF3Q96E29 417 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 FRMD6Q96NE9 622 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 TAAR6Q96RI8 345 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 MRPL1Q9BYD6 325 aaKnown RBP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 ACPTQ9BZG2 426 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 SH2D2AQ9NP31 389 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 MID1IP1Q9NPA3 183 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 PNO1Q9NRX1 252 aaKnown RBP8.48□□□□□ -1.05
SMC1A-203ENST00000428014 CNIH4Q9P003 139 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 HAO1Q9UJM8 370 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 FBXW2Q9UKT8 454 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 MAPRE3Q9UPY8 281 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
SMC1A-203ENST00000428014 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms