RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR51G2Q8NGK0 314 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 MSI2Q96DH6 328 aaKnown RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 MEAF6Q9HAF1 191 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ZDHHC2Q9UIJ5 367 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 PCTPQ9UKL6 214 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ACSL6Q9UKU0 697 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 DENRO43583 198 aaKnown RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 BRINP1O60477 761 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 HTR2BP41595 481 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 HTD2P86397 168 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 MEP1AQ16819 746 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF808Q8N4W9 903 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ACBD7Q8N6N7 88 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 C4orf32Q8N8J7 132 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ARMC5Q96C12 935 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 FUNDC2Q9BWH2 189 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 CCM2LQ9NUG4 571 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 EFNA1P20827 205 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 THBS3P49746 956 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 GPX6P59796 221 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 UFM1P61960 85 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 PRAMEF19Q5SWL8 479 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 RDH10Q8IZV5 341 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 PYROXD2Q8N2H3 581 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 TFGQ92734 400 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 CDK15Q96Q40 435 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 TSPAN10Q9H1Z9 355 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 NLE1Q9NVX2 485 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 OARD1Q9Y530 152 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 HMX3A6NHT5 357 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 C12orf71A8MTZ7 269 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 BDKRB1P46663 353 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 DUSP3P51452 185 aaPredicted RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 AKR1C2P52895 323 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 SEC13P55735 322 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ECH1Q13011 328 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PAFAH1B3Q15102 231 aaKnown RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 SLC2A7Q6PXP3 512 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 KREMEN2Q8NCW0 462 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 SPTSSAQ969W0 71 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 RAB39BQ96DA2 213 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PGAM5Q96HS1 289 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 NAALAD2Q9Y3Q0 740 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 DRD2P14416 443 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 TAS1R3Q7RTX0 852 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 GCDHQ92947 438 aaPredicted RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 CTPS2Q9NRF8 586 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ATG4BQ9Y4P1 393 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 F8W036 122 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 EMC8O43402 210 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 DLX3O60479 287 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 CH25HO95992 272 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 EDNRBP24530 442 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 GINS1Q14691 196 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PHF19Q5T6S3 580 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PRSS48Q7RTY5 328 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 BAZ2AQ9UIF9 1905 aaKnown RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 HEXBP07686 556 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PRKCAP17252 672 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ECM1Q16610 540 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 LRRC37A5PQ49AS3 106 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 VASH1Q7L8A9 365 aaPredicted RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF619Q8N2I2 560 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PREBQ9HCU5 417 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PTTG3PQ9NZH4 202 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 KLF15Q9UIH9 416 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 TP53TG5Q9Y2B4 290 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 FAM221BA6H8Z2 402 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 SPHARQ15513 63 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ARL14EPQ8N8R7 260 aaPredicted RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 MVB12BQ9H7P6 319 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 FAIMQ9NVQ4 179 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 CYP8B1Q9UNU6 501 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 J3QRK9 145 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 C6orf47O95873 294 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PGCP20142 388 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 MYLK3Q32MK0 819 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 FBXO48Q5FWF7 155 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 COMMD7Q86VX2 200 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 TSPYL5Q86VY4 417 aaPredicted RBP13.85□□□□□ -0.19
PTPN13-203ENST00000427191 OR2T4Q8NH00 348 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 FBXL8Q96CD0 374 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 PEA15Q15121 130 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ESX1Q8N693 406 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 CPT1CQ8TCG5 803 aa13.85□□□□□ -0.19
PTPN13-203ENST00000427191 ARSIQ5FYB1 569 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SAV1Q9H4B6 383 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PAQR5Q9NXK6 330 aaPredicted RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 OPN1SWP03999 348 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 RPS15AP62244 130 aaKnown RBP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF611Q8N823 705 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 OR8K5Q8NH50 307 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.84□□□□□ -0.19
PTPN13-203ENST00000427191 PRRT1Q99946 306 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 KDELR3O43731 214 aa13.84□□□□□ -0.19
PTPN13-203ENST00000427191 SOX14O95416 240 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms