RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 MAMDC2Q7Z304 686 aaPredicted RBP16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 SPPL2CQ8IUH8 684 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 C1orf52Q8N6N3 182 aaKnown RBP16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 POGLUT1Q8NBL1 392 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 PSD4Q8NDX1 1056 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 OR2W6PQ8NHA6 318 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 METTL6Q8TCB7 284 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 KCNA7Q96RP8 456 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 PELOQ9BRX2 385 aaKnown RBP16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 CNPPD1Q9BV87 410 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 ACPTQ9BZG2 426 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 PPCSQ9HAB8 311 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 CXorf21Q9HAI6 301 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 SH2D2AQ9NP31 389 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 VPS29Q9UBQ0 182 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 TIMM22Q9Y584 194 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 ICE1Q9Y2F5 2266 aa16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 SPTAN1Q13813 2472 aaKnown RBP16.96■□□□□ 0.31
SMARCAL1-205ENST00000425815 OR10H2O60403 315 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 ULK1O75385 1050 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 KRT6AP02538 564 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 KRT6BP04259 564 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 KRT15P19012 456 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 S1PR1P21453 382 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 PTGER1P34995 402 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 KRT6CP48668 564 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 XKP51811 444 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 MAPK12P53778 367 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 PKNOX1P55347 436 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 RAE1P78406 368 aaKnown RBP16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 CMPK2Q5EBM0 449 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 OR4K14Q8NGD5 310 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 OR52N2Q8NGI0 321 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 AGAP11Q8TF27 550 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 TNFRSF12AQ9NP84 129 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 TINAGQ9UJW2 476 aa16.95■□□□□ 0.3
SMARCAL1-205ENST00000425815 SERTM1A2A2V5 107 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 G3V3Y1 287 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCL21O00585 134 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 DYRK3O43781 588 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 HS6ST1O60243 411 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 ESRRBO95718 433 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 MYL2P10916 166 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 HSD3B1P14060 373 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 KRT4P19013 534 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 CNR1P21554 472 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 HSD3B2P26439 372 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 PIK3R1P27986 724 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 SSTR4P31391 388 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCT5P48643 541 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 NAGLUP54802 743 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 DNAJB13P59910 316 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 HMGCS1Q01581 520 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 DUSP2Q05923 314 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 RBPJQ06330 500 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 MGAT2Q10469 447 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 FUT7Q11130 342 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 CSTF3Q12996 717 aaKnown RBP16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 EBPQ15125 230 aaKnown RBP16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 SLC48A1Q6P1K1 146 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 OPN5Q6U736 354 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 SCIMPQ6UWF3 145 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 RTL4Q6ZR62 310 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 C4orf33Q8N1A6 199 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCNYL1Q8N7R7 359 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 ZNF615Q8N8J6 731 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 ZNF441Q8N8Z8 693 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 OR2M7Q8NG81 312 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 APIPQ96GX9 242 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCDC120Q96HB5 630 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 ART5Q96L15 291 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 SGCZQ96LD1 299 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 WWTR1Q9GZV5 400 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 SH3BGRL2Q9UJC5 107 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 GRID1Q9ULK0 1009 aa16.94■□□□□ 0.3
SMARCAL1-205ENST00000425815 SVILO95425 2214 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 ZGRF1Q86YA3 2104 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 C1orf226A1L170 272 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 CDH16O75309 829 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 ENO1P06733 434 aaKnown RBP16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCL3P10147 92 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 CPMP14384 443 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 PORP16435 677 aaPredicted RBP16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 PER3P56645 1201 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 TRA2BP62995 288 aaKnown RBP16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 FOXO1Q12778 655 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCDC153Q494R4 210 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 FAM180BQ6P0A1 224 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 RNF111Q6ZNA4 994 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 GHDCQ8N2G8 530 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 SLC15A4Q8N697 577 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 GOLM1Q8NBJ4 401 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 AENQ8WTP8 325 aaKnown RBP16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 ITLN2Q8WWU7 325 aaPredicted RBP16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 CCDC126Q96EE4 140 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 ZNF681Q96N22 645 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 PROK2Q9HC23 129 aa16.93■□□□□ 0.3
SMARCAL1-205ENST00000425815 MID1IP1Q9NPA3 183 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms