RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 GPR75O95800 540 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 COX7A2P14406 83 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-209ENST00000425239 GALNSP34059 522 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 BSGP35613 385 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 TIMP3P35625 211 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 PIK3CBP42338 1070 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 SLC12A2P55011 1212 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 RAB10P61026 200 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 KCNJ2P63252 427 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 ADAM8P78325 824 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 TNFRSF17Q02223 184 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 TBL3Q12788 808 aaKnown RBP13.74□□□□□ -0.21
ATG4B-209ENST00000425239 FOXD4Q12950 439 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-209ENST00000425239 CEBPEQ15744 281 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 HSPB2Q16082 182 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 VASNQ6EMK4 673 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 GRHL2Q6ISB3 625 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 CAPN12Q6ZSI9 719 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 STAG3L4Q8TBR4 150 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 SLC22A8Q8TCC7 542 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 UBE2E3Q969T4 207 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 RGMAQ96B86 450 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 MBD6Q96DN6 1003 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 PRDM14Q9GZV8 571 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 ALG9Q9H6U8 611 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 RYDENQ9NUL5 291 aaKnown RBP13.74□□□□□ -0.21
ATG4B-209ENST00000425239 JKAMPQ9P055 326 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 ZNF629Q9UEG4 869 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-209ENST00000425239 RNF112Q9ULX5 631 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 BOKQ9UMX3 212 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-209ENST00000425239 SPACA6W5XKT8 324 aa13.74□□□□□ -0.21
ATG4B-209ENST00000425239 A0A0A6YYD5 115 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 K7EPI3 171 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 TMPRSS11DO60235 418 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 EEDO75530 441 aaKnown RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 FAM155BO75949 473 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 LRATO95237 230 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 HPNP05981 417 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 PCNAP12004 261 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 SERPINB3P29508 390 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 SERPINB1P30740 379 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 GP5P40197 560 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 SSR2P43308 183 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 TRPC1P48995 793 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ZNF136P52737 540 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 HERVK_113P63132 956 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ERVK-8P63133 956 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 MRPS25P82663 173 aaKnown RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ZNF267Q14586 743 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 FLYWCH1Q4VC44 716 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 NHSL2Q5HYW2 709 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 BICRALQ6AI39 1079 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 TMEM64Q6YI46 380 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 CHDHQ8NE62 594 aaPredicted RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 PYROXD1Q8WU10 500 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 RNASE6Q93091 150 aaKnown RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ALPK1Q96QP1 1244 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ERVK-6Q9BXR3 956 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 DDX31Q9H8H2 851 aaKnown RBP13.73□□□□□ -0.21
ATG4B-209ENST00000425239 DMRT3Q9NQL9 472 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 PSD3Q9NYI0 1048 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 NUDT4Q9NZJ9 180 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ADGRE2Q9UHX3 823 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 ERVK-19Q9WJR5 959 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 PLEKHA6Q9Y2H5 1048 aa13.73□□□□□ -0.21
ATG4B-209ENST00000425239 OR6C76A6NM76 312 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 CCDC188H7C350 402 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 UBXN8O00124 270 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 ZSCAN12O43309 604 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 KERAO60938 352 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 S1PR1P21453 382 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 BMP5P22003 454 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 UQCRC1P31930 480 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 SOX18P35713 384 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 PEX19P40855 299 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 ASCL1P50553 236 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 PLIN5Q00G26 463 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 C3orf62Q6ZUJ4 267 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 CMC1Q7Z7K0 106 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 ZNF615Q8N8J6 731 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 FAM13CQ8NE31 585 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 FAM222BQ8WU58 562 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 RIT1Q92963 219 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 ADIPOR1Q96A54 375 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 TP53INP1Q96A56 240 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 ART5Q96L15 291 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 KRT12Q99456 494 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
ATG4B-209ENST00000425239 ANGPTL4Q9BY76 406 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 EXO5Q9H790 373 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 PLEKHF2Q9H8W4 249 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 PHF11Q9UIL8 331 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 EXPH5Q8NEV8 1989 aa13.72□□□□□ -0.21
ATG4B-209ENST00000425239 MED12Q93074 2177 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 HMX2A2RU54 273 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 GLOD5A6NK44 160 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms