RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CTNNBL1Q8WYA6 563 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 GORASP1Q9BQQ3 440 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 PRRG4Q9BZD6 226 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 LRRC40Q9H9A6 602 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 COPS7BQ9H9Q2 264 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 CNOT11Q9UKZ1 510 aaKnown RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 MYO6Q9UM54 1294 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SH2B3Q9UQQ2 575 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 DLGAP4Q9Y2H0 992 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 WBP11Q9Y2W2 641 aaKnown RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 EMC9Q9Y3B6 208 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 FREM1Q5H8C1 2179 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 RYR3Q15413 4870 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 IQANK1A0A1B0GTG1 560 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 CCT8L1PA6NM43 557 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 PFDN6O15212 129 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 PIN1P1O15428 100 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 B3GALT2O43825 422 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 PSIP1O75475 530 aaKnown RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 FBXO45P0C2W1 286 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 IL32P24001 234 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 MGAT1P26572 445 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 GMPRP36959 345 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 NR4A2P43354 598 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 KIR2DL2P43627 348 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 TMED10P49755 219 aaKnown RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 RAB38P57729 211 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 FBXW4P57775 412 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 IRF9Q00978 393 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 ID2Q02363 134 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 BSPH1Q075Z2 132 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 SEMA3AQ14563 771 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 RBBP5Q15291 538 aaKnown RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 RPS6KA2Q15349 733 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 TTLL9Q3SXZ7 439 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 ACSBG2Q5FVE4 666 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 NCMAPQ5T1S8 102 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 DARS2Q6PI48 645 aaKnown RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 MFSD7Q6UXD7 560 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 TMEM64Q6YI46 380 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 PPP1R21Q6ZMI0 780 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 RETREG3Q86VR2 466 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 CCDC25Q86WR0 208 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 LRRC6Q86X45 466 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 VSIG1Q86XK7 387 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 C1QL4Q86Z23 238 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 CDKL3Q8IVW4 592 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 SCUBE1Q8IWY4 988 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF595Q8IYB9 648 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 SVOPLQ8N434 492 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 GPATCH11Q8N954 259 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 NUP43Q8NFH3 380 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 STEAP2Q8NFT2 490 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 NUBPLQ8TB37 319 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 PTPMT1Q8WUK0 201 aaPredicted RBP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 S100PBPQ96BU1 408 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 DTNBP1Q96EV8 351 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 DGAT2Q96PD7 388 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 UCN2Q96RP3 112 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 CCT8L2Q96SF2 557 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 ACTR8Q9H981 624 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 PROK2Q9HC23 129 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 SERHLQ9NQF3 203 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 TAS2R10Q9NYW0 307 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 KLRF1Q9NZS2 232 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 HEY2Q9UBP5 337 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 SLC2A6Q9UGQ3 507 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 DKKL1Q9UK85 242 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.68□□□□□ -1.5
SDCBP-203ENST00000424270 FKBP7Q9Y680 259 aa5.68□□□□□ -1.5
SDCBP-203ENST00000424270 ANKRD33BA6NCL7 494 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 CD3EAPO15446 510 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 SEC14L5O43304 696 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 SPOPO43791 374 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 NIPSNAP2O75323 286 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 LY6HO94772 140 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 CD8AP01732 235 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 PTMAP06454 111 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 ARAFP10398 606 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 IMPA1P29218 277 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 ATP5DP30049 168 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 RPL22P35268 128 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 DEKP35659 375 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 HNRNPFP52597 415 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 EFNA4P52798 201 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 NRG3P56975 720 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 EEFSECP57772 596 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 HILS1P60008 231 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 STXBP1P61764 594 aaKnown RBP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 SERTAD2Q14140 314 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 CSHL1Q14406 222 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 KCNJ11Q14654 390 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 EFTUD2Q15029 972 aaKnown RBP eCLIP5.67□□□□□ -1.5
SDCBP-203ENST00000424270 ACAP2Q15057 778 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 RPS6KA1Q15418 735 aa5.67□□□□□ -1.5
SDCBP-203ENST00000424270 SGCBQ16585 318 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms