RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 CNTN1Q12860 1018 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SLAMF1Q13291 335 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 IKZF1Q13422 519 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PRSS53Q2L4Q9 553 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TRIM60Q495X7 471 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SYT14P1Q58G82 188 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 C1orf94Q6P1W5 598 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 LCTLQ6UWM7 567 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF767PQ75MW2 155 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SLC9B2Q86UD5 537 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TCEANCQ8N8B7 351 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF689Q96CS4 500 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 LINC00615Q96LM1 132 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ZIC5Q96T25 663 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 RIOK2Q9BVS4 552 aaKnown RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 NT5DC2Q9H857 520 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 BCL2L10Q9HD36 194 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ACSS1Q9NUB1 689 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PAQR5Q9NXK6 330 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ACSL6Q9UKU0 697 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 C17orf113A0A1B0GUU1 675 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 A0A1W2PQ45 241 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 A0A1W2PQY0 241 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SGK494L7N484 410 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PRODHO43272 600 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SLC43A1O75387 559 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 IL3P08700 152 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TSPAN19P0C672 248 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 FAM157BP0CG42 384 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TIMP2P16035 220 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 MYL12AP19105 171 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 MAP2K3P46734 347 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 CTSCP53634 463 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 GALK2Q01415 458 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 FAPQ12884 760 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TMEM115Q12893 351 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 HNRNPA0Q13151 305 aaKnown RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 GPR19Q15760 415 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PRAMEF8Q5VWM4 474 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 PRAMEF7Q5VXH5 474 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 Q6ZVL8 140 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 KIAA0907Q7Z7F0 614 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 KRT78Q8N1N4 520 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TBC1D19Q8N5T2 526 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 HORMAD2Q8N7B1 307 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 OR2A12Q8NGT7 310 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 JPH3Q8WXH2 748 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SCAMP4Q969E2 229 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TMEM19Q96HH6 336 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 MED30Q96HR3 178 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF582Q96NG8 517 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-204ENST00000424143 KATNB1Q9BVA0 655 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 SPATA5L1Q9BVQ7 753 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 JAM3Q9BX67 310 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TRIM39Q9HCM9 518 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 MIEF1Q9NQG6 463 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 STARD7Q9NQZ5 370 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TAS2R7Q9NYW3 318 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 CD84Q9UIB8 345 aa14.44□□□□□ -0.1
C9orf3-204ENST00000424143 TRAV19A0A0A6YYK7 116 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 PLD2O14939 933 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 SEMA7AO75326 666 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 CYP7B1O75881 506 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 URODP06132 367 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 KLK1P06870 262 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 SOAT1P35610 550 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 RECQLP46063 649 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 SMSP52788 366 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 CLDN20P56880 219 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 PCBP4P57723 403 aaKnown RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 BTG1P62324 171 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 TRA2BP62995 288 aaKnown RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 RACK1P63244 317 aaKnown RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 TAP2Q03519 686 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 MINDY4Q4G0A6 757 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 LIPKQ5VXJ0 399 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 PLET1Q6UQ28 207 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 CREB3L2Q70SY1 520 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 CHST14Q8NCH0 376 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF485Q8NCK3 441 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 ENKURQ8TC29 256 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 UFD1Q92890 307 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 MARVELD3Q96A59 401 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 ZNF514Q96K75 400 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 KCNJ15Q99712 375 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 MARVELD1Q9BSK0 173 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 MMP28Q9H239 520 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 OR51B5Q9H339 312 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 RANGRFQ9HD47 186 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 RPRD1BQ9NQG5 326 aaKnown RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 NUFIP1Q9UHK0 495 aaKnown RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 ADAM30Q9UKF2 790 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 ADAM29Q9UKF5 820 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 A4GNTQ9UNA3 340 aa14.43□□□□□ -0.1
C9orf3-204ENST00000424143 HELZP42694 1942 aaKnown RBP14.43□□□□□ -0.1
C9orf3-204ENST00000424143 OR2AG2A6NM03 316 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 KDM4EB2RXH2 506 aaPredicted RBP14.42□□□□□ -0.1
C9orf3-204ENST00000424143 H3BN98 237 aa14.42□□□□□ -0.1
C9orf3-204ENST00000424143 MTX2O75431 263 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms