RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 OR1E3Q8WZA6 343 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FIG4Q92562 907 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TTC9Q92623 222 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 WDR89Q96FK6 387 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF419Q96HQ0 510 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 HRASLS5Q96KN8 279 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CEP19Q96LK0 163 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TBL1YQ9BQ87 522 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RSRP1Q9BUV0 290 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RHOBTB2Q9BYZ6 727 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ACTR6Q9GZN1 396 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NARFLQ9H6Q4 476 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NTN4Q9HB63 628 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PARVBQ9HBI1 364 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 C11orf16Q9NQ32 467 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OCIAD1Q9NX40 245 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ACTR10Q9NZ32 417 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OPTCQ9UBM4 332 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 KCNN3Q9UGI6 736 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TRPS1Q9UHF7 1281 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ENOPH1Q9UHY7 261 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RWDD2AQ9UIY3 292 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 L3MBTL1Q9Y468 752 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SRRM2Q9UQ35 2752 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 A0A1B0GUS0 222 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC10BA6NIK2 292 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NKX2-8O15522 239 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ASNA1O43681 348 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 HPP00738 406 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PNLIPP16233 465 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RPL22P35268 128 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 EMX1Q04741 257 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SRSF4Q08170 494 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GANABQ14697 944 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SPIN3Q5JUX0 258 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PDPK2PQ6A1A2 396 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FAM220AQ7Z4H9 259 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 JAZF1Q86VZ6 243 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZC3H3Q8IXZ2 948 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CBARPQ8N350 705 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OR9A2Q8NGT5 310 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ACMSDQ8TDX5 336 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GIPC3Q8TF64 312 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CHAC2Q8WUX2 184 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 BORCS8Q96FH0 119 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZFP3Q96NJ6 502 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PSKH2Q96QS6 385 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TRAF4Q9BUZ4 470 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM15Q9C019 465 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GRIP2Q9C0E4 1043 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZCCHC4Q9H5U6 513 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CHMP1AQ9HD42 196 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PNPOQ9NVS9 261 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 DUSP13Q9UII6 198 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NOSIPQ9Y314 301 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OR1A2Q9Y585 309 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GGT3PA6NGU5 568 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 H0YJX3 145 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SLC16A5O15375 505 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NME1P15531 152 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TIMP2P16035 220 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 PRKCHP24723 683 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TACR1P25103 407 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SSTR4P31391 388 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NAA10P41227 235 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CTSKP43235 329 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ENTPD1P49961 510 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CLNS1AP54105 237 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 DRG2P55039 364 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 WDR4P57081 412 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 IL10RBQ08334 325 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TUBA3CQ13748 450 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF267Q14586 743 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 USP10Q14694 798 aaKnown RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FAM83EQ2M2I3 478 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FAM209AQ5JX71 171 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 AGAP9Q5VTM2 703 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CASP12Q6UXS9 341 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LIAT1Q6ZQX7 453 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 IL17RDQ8NFM7 739 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 OR2T6Q8NHC8 308 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 LRRC20Q8TCA0 184 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GRHL3Q8TE85 626 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 DACT3Q96B18 629 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 FBXL8Q96CD0 374 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RNF31Q96EP0 1072 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 RILPQ96NA2 401 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 SIGLEC12Q96PQ1 595 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TNFRSF13CQ96RJ3 184 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 CPPED1Q9BRF8 314 aaPredicted RBP3.36□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF416Q9BWM5 594 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 GON7Q9BXV9 100 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 BCO1Q9HAY6 547 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TRIM39Q9HCM9 518 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 TMEM45AQ9NWC5 275 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 KLHL9Q9P2J3 617 aa3.36□□□□□ -1.87
TOP2A-201ENST00000423485 NBEAL1Q6ZS30 2694 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 EIF1AYO14602 144 aaKnown RBP3.35□□□□□ -1.87
TOP2A-201ENST00000423485 SLC19A2O60779 497 aa3.35□□□□□ -1.87
TOP2A-201ENST00000423485 CBFA2T3O75081 653 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms