RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 CPSF2Q9P2I0 782 aaKnown RBP18.81■□□□□ 0.6
MCF2L-212ENST00000420013 ERVK-19Q9WJR5 959 aa18.81■□□□□ 0.6
MCF2L-212ENST00000420013 ASB4Q9Y574 426 aa18.81■□□□□ 0.6
MCF2L-212ENST00000420013 HRH3Q9Y5N1 445 aa18.81■□□□□ 0.6
MCF2L-212ENST00000420013 LIPGQ9Y5X9 500 aa18.81■□□□□ 0.6
MCF2L-212ENST00000420013 F8P00451 2351 aa18.81■□□□□ 0.6
MCF2L-212ENST00000420013 CELSR1Q9NYQ6 3014 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 TEP1Q99973 2627 aaKnown RBP18.8■□□□□ 0.6
MCF2L-212ENST00000420013 IQANK1A0A1B0GTG1 560 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 FAM47E-STBD1D6RA91 191 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 FAM58BPP0C7Q3 252 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 DNASE1L1P49184 302 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 MAN2A2P49641 1150 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 TFF3Q07654 80 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 EBPQ15125 230 aaKnown RBP18.8■□□□□ 0.6
MCF2L-212ENST00000420013 TSNAXIP1Q2TAA8 658 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 LYPD8Q6UX82 237 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 B3GNT6Q6ZMB0 384 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 SREK1Q8WXA9 508 aaKnown RBP18.8■□□□□ 0.6
MCF2L-212ENST00000420013 GPR78Q96P69 363 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 SERPINI1Q99574 410 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 CNPPD1Q9BV87 410 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 WWTR1Q9GZV5 400 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 PNPLA3Q9NST1 481 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 TUBA8Q9NY65 449 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-212ENST00000420013 IKBKGQ9Y6K9 419 aa18.8■□□□□ 0.6
MCF2L-212ENST00000420013 NCKAP5O14513 1909 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 FAM90A27PA6NNH2 459 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 STX16-NPEPL1H3BU86 382 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 STX16O14662 325 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 TMPRSS11DO60235 418 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 EEDO75530 441 aaKnown RBP18.79■□□□□ 0.6
MCF2L-212ENST00000420013 CLDN9O95484 217 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 AIFM1O95831 613 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 INHBAP08476 426 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 HOXD4P09016 255 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-212ENST00000420013 RBP1P09455 135 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 FBXO45P0C2W1 286 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 MSX1P28360 303 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 SERPINB3P29508 390 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 MAGEA12P43365 314 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 SERPINB9P50453 376 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 SLC37A1P57057 533 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 NUP107P57740 925 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 TLE4Q04727 773 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 GXYLT1Q4G148 440 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 TBCELQ5QJ74 424 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 ADGRD1Q6QNK2 874 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 RPRMLQ8N4K4 120 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 PTGR2Q8N8N7 351 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-212ENST00000420013 MNS1Q8NEH6 495 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 SLC44A1Q8WWI5 657 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 GAL3ST4Q96RP7 486 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 NTMT1Q9BV86 223 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 KCNJ16Q9NPI9 418 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 NINJ2Q9NZG7 142 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 PCDHGB3Q9Y5G1 929 aa18.79■□□□□ 0.6
MCF2L-212ENST00000420013 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.79■□□□□ 0.6
MCF2L-212ENST00000420013 LRRC14BA6NHZ5 514 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 PRKRAO75569 313 aaKnown RBP18.78■□□□□ 0.6
MCF2L-212ENST00000420013 SIX3O95343 332 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-212ENST00000420013 SLC35E2P0CK97 266 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 GABRA1P14867 456 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 TMED10P49755 219 aaKnown RBP18.78■□□□□ 0.6
MCF2L-212ENST00000420013 CCNG1P51959 295 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 KCNJ2P63252 427 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 SLC10A1Q14973 349 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 NTRK2Q16620 822 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 GGTA1PQ4G0N0 100 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 WLSQ5T9L3 541 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 DGAT2L6Q6ZPD8 337 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 TAGAPQ8N103 731 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 IFT81Q8WYA0 676 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 RIT1Q92963 219 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 PPWD1Q96BP3 646 aaKnown RBP18.78■□□□□ 0.6
MCF2L-212ENST00000420013 VPS11Q9H270 941 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 LDAHQ9H6V9 325 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 ZFP64Q9NPA5 681 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 NPDC1Q9NQX5 325 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-212ENST00000420013 B4GALT7Q9UBV7 327 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 ADAM29Q9UKF5 820 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 RNF11Q9Y3C5 154 aa18.78■□□□□ 0.6
MCF2L-212ENST00000420013 TRGV5A0A0B4J1U4 118 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 A0A1W2PR48 441 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 CAPN14A8MX76 684 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 HRKO00198 91 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 TOXO94900 526 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 COL6A2P12110 1019 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 CNTFP26441 200 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 PIGAP37287 484 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 ARL1P40616 181 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-212ENST00000420013 NR0B1P51843 470 aaKnown RBP18.77■□□□□ 0.6
MCF2L-212ENST00000420013 PMPCAQ10713 525 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 ZNF267Q14586 743 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-212ENST00000420013 C6orf163Q5TEZ5 329 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 FRG2Q64ET8 278 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 PAGE2Q7Z2X7 111 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 LRRC25Q8N386 305 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-212ENST00000420013 FAM13CQ8NE31 585 aa18.77■□□□□ 0.6
MCF2L-212ENST00000420013 ATP6V1E2Q96A05 226 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms