RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PTBP2Q9UKA9 531 aaKnown RBP6.51□□□□□ -1.37
HMGN1-205ENST00000419378 ASH1LQ9NR48 2969 aaKnown RBP6.51□□□□□ -1.37
HMGN1-205ENST00000419378 SCN3AQ9NY46 2000 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 DOCK10Q96BY6 2186 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 A0A087WUV0 522 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 IGHV1-45A0A0A0MS14 117 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 NSG1A0A0A6YYJ2 146 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 URADA6NGE7 173 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 SYCE1LA8MT33 242 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 C4orf51C9J302 202 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 PCDH17O14917 1159 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 CLGNO14967 610 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 CCNT2O60583 730 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 KLHL41O60662 606 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 DNAJB6O75190 326 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 SORBS2O94875 1100 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 SERPINA6P08185 405 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 CYC1P08574 325 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 ABHD2P08910 425 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 CD22P20273 847 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 GSTM2P28161 218 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TYK2P29597 1187 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 HNRNPH1P31943 449 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 HNF4AP41235 474 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 MSH2P43246 934 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 MAGEA12P43365 314 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 AGTR2P50052 363 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 SERPINB9P50453 376 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 RAB8AP61006 207 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 SKP1P63208 163 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 Q0VFX4 171 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 DOC2AQ14183 400 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 ZNF124Q15973 351 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 XKR6Q5GH73 641 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TOR1AIP1Q5JTV8 583 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 MFSD4BQ5TF39 518 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 IRAK1BP1Q5VVH5 260 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 ADNP2Q6IQ32 1131 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 JMJD6Q6NYC1 403 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TMEM205Q6UW68 189 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TAOK1Q7L7X3 1001 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 GSPT2Q8IYD1 628 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 KRT78Q8N1N4 520 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 RBMXL3Q8N7X1 1067 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 LINC01356Q8N9X3 169 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 Q8NA96 180 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TRPV3Q8NET8 790 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TTLQ8NG68 377 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 UTP15Q8TED0 518 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 DCAKDQ8WVC6 231 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 METTL21AQ8WXB1 218 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TM9SF4Q92544 642 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 GFM2Q969S9 779 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 PNPLA2Q96AD5 504 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 TBC1D20Q96BZ9 403 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 WDR34Q96EX3 536 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 PTCD3Q96EY7 689 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 THOC3Q96J01 351 aaKnown RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 GPR78Q96P69 363 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 OR1F2PQ96R84 312 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 EFCAB11Q9BUY7 163 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 AICDAQ9GZX7 198 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 LHPPQ9H008 270 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 ZNF700Q9H0M5 742 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 VPS11Q9H270 941 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 KLHL31Q9H511 634 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 NT5DC2Q9H857 520 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 ZBTB20Q9HC78 741 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 LANCL2Q9NS86 450 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 OPTCQ9UBM4 332 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 ADAM29Q9UKF5 820 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 IKBKGQ9Y6K9 419 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 LRRK2Q5S007 2527 aa6.5□□□□□ -1.37
HMGN1-205ENST00000419378 RP1L1Q8IWN7 2480 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-205ENST00000419378 EXOC1LA0A1B0GW35 172 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CCDC189A1A4V9 331 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 OR2W5A6NFC9 320 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CCDC154A6NI56 674 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 VSTM5A8MXK1 200 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 POC1B-GALNT4F8VUJ3 575 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 K7EPI3 171 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 RIPK2O43353 540 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CHST10O43529 356 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 KLK8O60259 260 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CDC123O75794 336 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 KRT38O76015 456 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 KLHL2O95198 593 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 TBX6O95947 436 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 SERPINA7P05543 415 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 FHP07954 510 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CELA2AP08217 269 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 PRR35P0CG20 571 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 SMIM10L1P0DMW3 83 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 GFAPP14136 432 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 IL10P22301 178 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CTSSP25774 331 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CNTFP26441 200 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 MLLT10P55197 1068 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 STXBP1P61764 594 aaKnown RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 RHAGQ02094 409 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms