RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 CDC42P60953 191 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 HSD11B2P80365 405 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ZXDAP98168 799 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ZNF155Q12901 538 aaPredicted RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 TBC1D25Q3MII6 688 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 RBM48Q5RL73 367 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 MRM1Q6IN84 353 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 OGFOD3Q6PK18 319 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 CCDC116Q8IYX3 515 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 FBXL6Q8N531 539 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 COX18Q8N8Q8 333 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 OR5AK3PQ8NH89 298 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ELF4Q99607 663 aaPredicted RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 PIP5K1AQ99755 562 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 THSD1Q9NS62 852 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 NLGN3Q9NZ94 848 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 FBXO4Q9UKT5 387 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 A0A1W2PR77 199 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 H0YIG0 161 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 GADD45GO95257 159 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 FUCA1P04066 466 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ETFAP13804 333 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 CPMP14384 443 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 PNLIPP16233 465 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 EFNA1P20827 205 aaPredicted RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 TUBA4AP68366 448 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 DCST1Q5T197 706 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 USP53Q70EK8 1073 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 VN1R5Q7Z5H4 357 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 CYP4Z2PQ8N1L4 340 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 PSMA8Q8TAA3 256 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 SLC38A4Q969I6 547 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 TGM7Q96PF1 710 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 OR2A5Q96R48 311 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ANKRD60Q9BZ19 345 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ADNPQ9H2P0 1102 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 SYNDIG1Q9H7V2 258 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 RPS6KB2Q9UBS0 482 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 DAPP1Q9UN19 280 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 A0A087WV62 115 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 FAM149AA5PLN7 773 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 SLC9B1P1A6NJY1 282 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 H3BNH8 94 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 SCN2BO60939 215 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 FEN1P39748 380 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 CSTF1Q05048 431 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 DEFB133Q30KQ1 61 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 KCTD21Q4G0X4 260 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 MFSD4BQ5TF39 518 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ZNF551Q7Z340 670 aaPredicted RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 OFCC1Q8IZS5 231 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 TSPAN14Q8NG11 270 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ZNF570Q96NI8 536 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 TRNT1Q96Q11 434 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 MAPKAP1Q9BPZ7 522 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 G6PC3Q9BUM1 346 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 SORBS1Q9BX66 1292 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 PINK1Q9BXM7 581 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 MTHFD2LQ9H903 347 aaPredicted RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 ASB4Q9Y574 426 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 GMPPBQ9Y5P6 360 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 ENPP4Q9Y6X5 453 aa7.93□□□□□ -1.14
USP54-203ENST00000418501 TCF20Q9UGU0 1960 aaKnown RBP7.93□□□□□ -1.14
USP54-203ENST00000418501 IRGMA1A4Y4 181 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 C19orf67A6NJJ6 358 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 SYT5O00445 386 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 TMPRSS11DO60235 418 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 OR2B3O76000 313 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 NSA2O95478 260 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 CD63P08962 238 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 SLC35E2P0CK97 266 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 HPGDP15428 266 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 CD247P20963 164 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 CSNK1EP49674 416 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 MAZP56270 477 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 PCBP4P57723 403 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 PHC1P78364 1004 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 MSRB3Q8IXL7 192 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 PIGKQ92643 395 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 COL21A1Q96P44 957 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 Q9N2J8 555 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 TEX10Q9NXF1 929 aaPredicted RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 MGAT4BQ9UQ53 548 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 F5P12259 2224 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 A8MVJ9 347 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 GALR3O60755 368 aaPredicted RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 H6PDO95479 791 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 CKMT2P17540 419 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 AQP1P29972 269 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 PXNP49023 591 aaPredicted RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 CLK3P49761 638 aaKnown RBP7.92□□□□□ -1.14
USP54-203ENST00000418501 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP54-203ENST00000418501 TMEM44Q2T9K0 475 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 FGD3Q5JSP0 725 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 BROXQ5VW32 411 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 FBXO42Q6P3S6 717 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 SLC22A18ASQ8N1D0 253 aa7.92□□□□□ -1.14
USP54-203ENST00000418501 MIPOL1Q8TD10 442 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms