RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 ASB4Q9Y574 426 aa13.04□□□□□ -0.32
LINC01006-202ENST00000418309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC01006-202ENST00000418309 HCFC1P51610 2035 aa13.04□□□□□ -0.32
LINC01006-202ENST00000418309 NINQ8N4C6 2090 aa13.04□□□□□ -0.32
LINC01006-202ENST00000418309 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
LINC01006-202ENST00000418309 A0A0A6YYD5 115 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 TRGV5A0A0B4J1U4 118 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 A0A1B0GVC2 190 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 A0A1W2PR48 441 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 HMX2A2RU54 273 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 FOXO6A8MYZ6 492 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 AQP7O14520 342 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 TMPRSS11DO60235 418 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 KLK8O60259 260 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 SUSD5O60279 629 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 TOXO94900 526 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 CLDN9O95484 217 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 GBAP04062 536 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 NR2F6P10588 404 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 SERPINB3P29508 390 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 BSGP35613 385 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 CCNG1P51959 295 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 CKAP4Q07065 602 aaKnown RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 TBL3Q12788 808 aaKnown RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 CUL3Q13618 768 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 HYAL4Q2M3T9 481 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 TTC19Q6DKK2 380 aaPredicted RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 MRM1Q6IN84 353 aaKnown RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 B3GNT6Q6ZMB0 384 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 ACBD4Q8NC06 268 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 PHF21BQ96EK2 531 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 CDK15Q96Q40 435 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 TTYH2Q9BSA4 534 aa13.03□□□□□ -0.32
LINC01006-202ENST00000418309 NOL11Q9H8H0 719 aaKnown RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 DDX31Q9H8H2 851 aaKnown RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 BOKQ9UMX3 212 aaPredicted RBP13.03□□□□□ -0.32
LINC01006-202ENST00000418309 DCHS2Q6V1P9 2916 aa13.02□□□□□ -0.32
LINC01006-202ENST00000418309 FOXE1O00358 373 aaPredicted RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 LRATO95237 230 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 AIFM1O95831 613 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ALDOAP04075 364 aaKnown RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 PIK3R1P27986 724 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ZFP36L2P47974 494 aaKnown RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 SPRED3Q2MJR0 410 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 LYPD8Q6UX82 237 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 CDH24Q86UP0 819 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 NUDT13Q86X67 352 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 TAGAPQ8N103 731 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 PLD6Q8N2A8 252 aaKnown RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 FBXW8Q8N3Y1 598 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 PTGR2Q8N8N7 351 aaPredicted RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 L3MBTL4Q8NA19 623 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 OR10G3Q8NGC4 313 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 WDR20Q8TBZ3 569 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 PAQR8Q8TEZ7 354 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 UCN3Q969E3 161 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 GPR78Q96P69 363 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 SERPINI1Q99574 410 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 TREX2Q9BQ50 279 aaPredicted RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 WWTR1Q9GZV5 400 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 SH2D2AQ9NP31 389 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ZFP64Q9NPA5 681 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 NPDC1Q9NQX5 325 aaPredicted RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ZDHHC18Q9NUE0 388 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 PSD3Q9NYI0 1048 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 MTRF1LQ9UGC7 380 aaKnown RBP13.02□□□□□ -0.33
LINC01006-202ENST00000418309 IKBKGQ9Y6K9 419 aa13.02□□□□□ -0.33
LINC01006-202ENST00000418309 C2orf92A0A1B0GVN3 265 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 OR6C76A6NM76 312 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 PGRMC2O15173 223 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 HCN1O60741 890 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 WDR1O75083 606 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 INHBAP08476 426 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 RBP1P09455 135 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 FBXO45P0C2W1 286 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 RFPL3SP0C7P2 107 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 SLC35E2P0CK97 266 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 GLI4P10075 376 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 MSX1P28360 303 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 SLC37A1P57057 533 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 TFF3Q07654 80 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 TECRLQ5HYJ1 363 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 C6orf163Q5TEZ5 329 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 OR52E8Q6IFG1 317 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 METTL2BQ6P1Q9 378 aaKnown RBP13.01□□□□□ -0.33
LINC01006-202ENST00000418309 CLYBLQ8N0X4 340 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 LIX1Q8N485 282 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 ZNF559Q9BR84 538 aa13.01□□□□□ -0.33
LINC01006-202ENST00000418309 DOHHQ9BU89 302 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms