RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 GPR85P60893 370 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 GTF3C1Q12789 2109 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 ASPHQ12797 758 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 PIGGQ5H8A4 983 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 RNFT1Q5M7Z0 435 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 C6orf163Q5TEZ5 329 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 RNF111Q6ZNA4 994 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 SLC29A4Q7RTT9 530 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 SPPL2CQ8IUH8 684 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 ZFP62Q8NB50 900 aaPredicted RBP14.19□□□□□ -0.14
NUP50-204ENST00000417702 DOK4Q8TEW6 326 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 AENQ8WTP8 325 aaKnown RBP14.19□□□□□ -0.14
NUP50-204ENST00000417702 UCN3Q969E3 161 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 CAVIN3Q969G5 261 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 HBEGFQ99075 208 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 FAIM2Q9BWQ8 316 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 VPS29Q9UBQ0 182 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 GRID1Q9ULK0 1009 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 NOTCH2Q04721 2471 aa14.19□□□□□ -0.14
NUP50-204ENST00000417702 C1orf226A1L170 272 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 HRKO00198 91 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 CDH16O75309 829 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 CLDN1O95832 211 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 ESRRAP11474 423 aaPredicted RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 ABOP16442 354 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 RFC3P40938 356 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 XKP51811 444 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 NAA20P61599 178 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 PLGLB1Q02325 96 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 GALNT1Q10472 559 aaPredicted RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 TBL3Q12788 808 aaKnown RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 CSTF3Q12996 717 aaKnown RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 C3AR1Q16581 482 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 ZNF750Q32MQ0 723 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 CCDC153Q494R4 210 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 TCHHL1Q5QJ38 904 aaPredicted RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 HIST2H2BCQ6DN03 193 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 ZYG11AQ6WRX3 759 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 BNC2Q6ZN30 1099 aaPredicted RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 GALNT12Q8IXK2 581 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 C9orf40Q8IXQ3 194 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 SLC15A4Q8N697 577 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 C1orf52Q8N6N3 182 aaKnown RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 GBP7Q8N8V2 638 aaPredicted RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 CCDC63Q8NA47 563 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 GOLM1Q8NBJ4 401 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 C16orf52Q8NHV5 167 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 EPS8L3Q8TE67 593 aaKnown RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 GAL3ST4Q96RP7 486 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 RYDENQ9NUL5 291 aaKnown RBP14.18□□□□□ -0.14
NUP50-204ENST00000417702 RAB21Q9UL25 225 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 PSME2Q9UL46 239 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 EMCNQ9ULC0 261 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 ZNF835Q9Y2P0 537 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 PCDHA9Q9Y5H5 950 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 MAST4O15021 2626 aa14.18□□□□□ -0.14
NUP50-204ENST00000417702 GOLGA6L10A6NI86 522 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 OR6C76A6NM76 312 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 FOXO6A8MYZ6 492 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 ACOT7O00154 380 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 COPEO14579 308 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 ESRRBO95718 433 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 PROCP04070 461 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 P04436 131 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 CPMP14384 443 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 CNR1P21554 472 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 NT5EP21589 574 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 CRHR1P34998 444 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 TRA2BP62995 288 aaKnown RBP14.17□□□□□ -0.14
NUP50-204ENST00000417702 CFAP157Q5JU67 520 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 Q6ZPB1 254 aaPredicted RBP14.17□□□□□ -0.14
NUP50-204ENST00000417702 GK5Q6ZS86 529 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 SH2D5Q6ZV89 423 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 DND1Q8IYX4 353 aaKnown RBP14.17□□□□□ -0.14
NUP50-204ENST00000417702 CXorf21Q9HAI6 301 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 MID1IP1Q9NPA3 183 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 SACM1LQ9NTJ5 587 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 DEPPQ9NTK1 212 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 TINAGQ9UJW2 476 aa14.17□□□□□ -0.14
NUP50-204ENST00000417702 TLDC2A0PJX2 215 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 G3V2L1 256 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 H3BQF6 201 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 PRRG2O14669 202 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 HS6ST1O60243 411 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 CDC40O60508 579 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUP50-204ENST00000417702 PLIN3O60664 434 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 ZNF354AO60765 605 aaPredicted RBP14.16□□□□□ -0.14
NUP50-204ENST00000417702 CRCPO75575 148 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 ERAL1O75616 437 aaKnown RBP14.16□□□□□ -0.14
NUP50-204ENST00000417702 PORP16435 677 aaPredicted RBP14.16□□□□□ -0.14
NUP50-204ENST00000417702 KRT4P19013 534 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 SERPINB3P29508 390 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 PTGER1P34995 402 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 SLC37A1P57057 533 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 HSF1Q00613 529 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 ACSM2AQ08AH3 577 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 SPIN4Q56A73 249 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 HLA-DQA1Q5Y7H0 255 aa14.16□□□□□ -0.14
NUP50-204ENST00000417702 ACSM2BQ68CK6 577 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms