RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 HLA-DQB1P01920 261 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
CHEK2-210ENST00000416671 EPORP19235 508 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 OR1E2P47887 323 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 WNT3P56703 355 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 RGS1Q08116 209 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 SHHQ15465 462 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 LIPKQ5VXJ0 399 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 METTL2BQ6P1Q9 378 aaKnown RBP13.16□□□□□ -0.3
CHEK2-210ENST00000416671 Q8N402 240 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 RNF175Q8N4F7 328 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 SLC37A3Q8NCC5 494 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 AKAP1Q92667 903 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHEK2-210ENST00000416671 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 UPRTQ96BW1 309 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 FAM129BQ96TA1 746 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 MARVELD1Q9BSK0 173 aa13.16□□□□□ -0.3
CHEK2-210ENST00000416671 ELF5Q9UKW6 265 aaPredicted RBP13.16□□□□□ -0.3
CHEK2-210ENST00000416671 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 TRIM77I1YAP6 450 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 SCN2BO60939 215 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 ENTPD6O75354 484 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 ANXA5P08758 320 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 MSL3P1P0C860 447 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 COX7A2P14406 83 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PRPH2P23942 346 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 APEX1P27695 318 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 TEAD4Q15561 434 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 UGT8Q16880 541 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 IFI44LQ53G44 452 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 MEDAGQ5VYS4 303 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 NOXRED1Q6NXP6 359 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 TEX261Q6UWH6 196 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 GRASPQ7Z6J2 395 aaPredicted RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 SYT12Q8IV01 421 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PHC2Q8IXK0 858 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 FAM46DQ8NEK8 389 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PHOSPHO2Q8TCD6 241 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 SH3KBP1Q96B97 665 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 ATG10Q9H0Y0 220 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 SLC25A19Q9HC21 320 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 GALNT9Q9HCQ5 603 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 FAM120CQ9NX05 1096 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 U3KQ87 197 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 SPTBN5Q9NRC6 3674 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PRR23AA6NEV1 266 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 TMEM202A6NGA9 273 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 BET1O15155 118 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 OPN1SWP03999 348 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 CTSLP07711 333 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 HBQ1P09105 142 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 OR56A5P0C7T3 313 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 AMD1P17707 334 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 ITPKAP23677 461 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 POU1F1P28069 291 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PCGF2P35227 344 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 CRISP1P54107 249 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 MLLT11Q13015 90 aaPredicted RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 C1DQ13901 141 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 ANKRD54Q6NXT1 300 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 ZNF680Q8NEM1 530 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 CSGALNACT1Q8TDX6 532 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 GPR137Q96N19 417 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 CPEB1Q9BZB8 566 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 CHST8Q9H2A9 424 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PPIL3Q9H2H8 161 aaKnown RBP13.15□□□□□ -0.3
CHEK2-210ENST00000416671 FTSJ1Q9UET6 329 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PPIL1Q9Y3C6 166 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PCDHGB7Q9Y5F8 929 aa13.15□□□□□ -0.3
CHEK2-210ENST00000416671 PCDH17O14917 1159 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 FAM157BP0CG42 384 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 ATP1B2P14415 290 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-210ENST00000416671 ZNF250P15622 560 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 AOAHP28039 575 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 RECQLP46063 649 aaPredicted RBP13.14□□□□□ -0.31
CHEK2-210ENST00000416671 ABATP80404 500 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 NCF4Q15080 339 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 ZNF628Q5EBL2 1059 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 C22orf42Q6IC83 251 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 CDH24Q86UP0 819 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 C11orf65Q8NCR3 313 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 AP3S1Q92572 193 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 MTERF3Q96E29 417 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 MSANTD3Q96H12 275 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 SAMD11Q96NU1 681 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 P2RY13Q9BPV8 354 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 CORO2BQ9UQ03 480 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 YBX2Q9Y2T7 364 aaKnown RBP13.14□□□□□ -0.31
CHEK2-210ENST00000416671 IRAK3Q9Y616 596 aa13.14□□□□□ -0.31
CHEK2-210ENST00000416671 GCM2O75603 506 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms