RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TNFRSF8P28908 595 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 SSTR4P31391 388 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 PIGAP37287 484 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 BUD31P41223 144 aaPredicted RBP13.94□□□□□ -0.18
UBXN4-203ENST00000416538 MAGEA5P43359 124 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 CCNG1P51959 295 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 CDH13P55290 713 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 SLC37A1P57057 533 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 PPIAP62937 165 aaKnown RBP13.94□□□□□ -0.18
UBXN4-203ENST00000416538 PHEXP78562 749 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 EBPQ15125 230 aaKnown RBP13.94□□□□□ -0.18
UBXN4-203ENST00000416538 MPEG1Q2M385 716 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 TSNAXIP1Q2TAA8 658 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 GGTA1PQ4G0N0 100 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 PIGGQ5H8A4 983 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
UBXN4-203ENST00000416538 FRG2Q64ET8 278 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 GOLM1Q8NBJ4 401 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 TANKQ92844 425 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 FRG2BQ96QU4 278 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 HBEGFQ99075 208 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 VKORC1Q9BQB6 163 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 CENPKQ9BS16 269 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 WWTR1Q9GZV5 400 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 PROK2Q9HC23 129 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 TNFRSF10DQ9UBN6 386 aa13.94□□□□□ -0.18
UBXN4-203ENST00000416538 A0A087WUV0 522 aaPredicted RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 LRRC3CA6NJW4 275 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 PRRG2O14669 202 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 KRT38O76015 456 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 CLDN14O95500 239 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ABHD2P08910 425 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 FAM153BP0C7A2 387 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ENDOUP21128 410 aaKnown RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 SOX18P35713 384 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ARL1P40616 181 aaPredicted RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 PLGLB1Q02325 96 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 GALNT1Q10472 559 aaPredicted RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF267Q14586 743 aaPredicted RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 FAM153CQ494X1 144 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 PRAMEF20Q5VT98 475 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 OR52E8Q6IFG1 317 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 OPN5Q6U736 354 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 CYP20A1Q6UW02 462 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 TMEM64Q6YI46 380 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 CEP128Q6ZU80 1094 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF295-AS1Q8N0V1 137 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF441Q8N8Z8 693 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 ACBD4Q8NC06 268 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 OR5L2Q8NGL0 311 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 SPACA9Q96E40 222 aaPredicted RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 GAL3ST4Q96RP7 486 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 SERPINI1Q99574 410 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 MRPL57Q9BQC6 102 aaKnown RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 C1QTNF3Q9BXJ4 246 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 MRPL46Q9H2W6 279 aaKnown RBP13.93□□□□□ -0.18
UBXN4-203ENST00000416538 PSD3Q9NYI0 1048 aa13.93□□□□□ -0.18
UBXN4-203ENST00000416538 EXOC1LA0A1B0GW35 172 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 IGHG3P01860 377 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 KLK1P06870 262 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 COL6A2P12110 1019 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 CNR1P21554 472 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 SMSP52788 366 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 DUSP2Q05923 314 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 SGO1Q5FBB7 561 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 ARHGAP11AQ6P4F7 1023 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 RNF111Q6ZNA4 994 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 GK5Q6ZS86 529 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 TAOK1Q7L7X3 1001 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 METTL4Q8N3J2 472 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 MNS1Q8NEH6 495 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 OR10G3Q8NGC4 313 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 PAQR8Q8TEZ7 354 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 MZB1Q8WU39 189 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 ATP6V1E2Q96A05 226 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 SDCCAG3Q96C92 435 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 RBM18Q96H35 190 aaKnown RBP13.92□□□□□ -0.18
UBXN4-203ENST00000416538 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 TMEM237Q96Q45 408 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 FAM173AQ9BQD7 235 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 TXLNGYQ9BZA5 131 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 TSPYL1Q9H0U9 437 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 ZNF703Q9H7S9 590 aaPredicted RBP13.92□□□□□ -0.18
UBXN4-203ENST00000416538 CXorf21Q9HAI6 301 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 PNPLA3Q9NST1 481 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 SACM1LQ9NTJ5 587 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 TMEM216Q9P0N5 145 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 DTX4Q9Y2E6 619 aa13.92□□□□□ -0.18
UBXN4-203ENST00000416538 CHCHD2Q9Y6H1 151 aaPredicted RBP13.92□□□□□ -0.18
UBXN4-203ENST00000416538 CCDC168Q8NDH2 2452 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 TEP1Q99973 2627 aaKnown RBP13.91□□□□□ -0.18
UBXN4-203ENST00000416538 NPIPA2E9PIF3 369 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 NPIPA3F8WFD2 350 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 RIPK2O43353 540 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 OR10H2O60403 315 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 SMIM24O75264 130 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 OR4F21O95013 312 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 PDYNP01213 254 aa13.91□□□□□ -0.18
UBXN4-203ENST00000416538 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms