RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 A0A1W2PR77 199 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 PTGES3LE9PB15 166 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 CAPN5O15484 640 aaPredicted RBP14.04□□□□□ -0.16
USP4-203ENST00000415188 KCNJ13O60928 360 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 FAM20BO75063 409 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 CLPXO76031 633 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 SLC35G4P0C7Q5 338 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 CYP4B1P13584 511 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 ACVR2AP27037 513 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 MAT2AP31153 395 aaKnown RBP14.04□□□□□ -0.16
USP4-203ENST00000415188 FMO3P31513 532 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 GGT2P36268 569 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 DSTNP60981 165 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 RPP38P78345 283 aaKnown RBP14.04□□□□□ -0.16
USP4-203ENST00000415188 EMX1Q04741 257 aaPredicted RBP14.04□□□□□ -0.16
USP4-203ENST00000415188 SYT6Q5T7P8 510 aaPredicted RBP14.04□□□□□ -0.16
USP4-203ENST00000415188 AGBL4Q5VU57 503 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 SLC16A12Q6ZSM3 486 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 DEPDC4Q8N2C3 294 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 PLA2G15Q8NCC3 412 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 FAM81AQ8TBF8 368 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 CIDECQ96AQ7 238 aaPredicted RBP14.04□□□□□ -0.16
USP4-203ENST00000415188 NEURL3Q96EH8 262 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 IL17FQ96PD4 163 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 RAB11FIP5Q9BXF6 653 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 TEX101Q9BY14 249 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 CCDC90BQ9GZT6 254 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 A4GALTQ9NPC4 353 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 NECTIN3Q9NQS3 549 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 TAAR2Q9P1P5 351 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 TMEM98Q9Y2Y6 226 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 ZNF451Q9Y4E5 1061 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 PCDHGA10Q9Y5H3 936 aa14.04□□□□□ -0.16
USP4-203ENST00000415188 A0A1B0GTQ1 180 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SAP18O00422 153 aaKnown RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 PLPP1O14494 284 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 LATO43561 262 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 PLRG1O43660 514 aaKnown RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 XPNPEP2O43895 674 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 PCDHGA12O60330 932 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 PCCBP05166 539 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 HTR1BP28222 390 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 CD38P28907 300 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 AQP1P29972 269 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SOAT1P35610 550 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 ST13P50502 369 aaKnown RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 HMGA2P52926 109 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 MC1RQ01726 317 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SPIBQ01892 262 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 MEF2AQ02078 507 aaPredicted RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 HEPACAMQ14CZ8 416 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 LAPTM4AQ15012 233 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SHBQ15464 509 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SLC5A12Q1EHB4 618 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SAXO2Q658L1 398 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TSEN54Q7Z6J9 526 aaKnown RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 RNF130Q86XS8 419 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 MARCH9Q86YJ5 346 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 ZNF740Q8NDX6 193 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TTLQ8NG68 377 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 OR10G2Q8NGC3 310 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TRUB1Q8WWH5 349 aaKnown RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 YIPF6Q96EC8 236 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 PDXPQ96GD0 296 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SIGLEC11Q96RL6 698 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 ELF4Q99607 663 aaPredicted RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 CDC6Q99741 560 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 PIP5K1AQ99755 562 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TIMM29Q9BSF4 260 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 DGCR6LQ9BY27 220 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 SLC6A16Q9GZN6 736 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 EXD2Q9NVH0 621 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TBCCD1Q9NVR7 557 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 ERVK-18Q9QC07 812 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TAC3Q9UHF0 121 aa14.03□□□□□ -0.16
USP4-203ENST00000415188 TDRKHQ9Y2W6 561 aaKnown RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 HEMK1Q9Y5R4 338 aaPredicted RBP14.03□□□□□ -0.16
USP4-203ENST00000415188 IGLON5A6NGN9 336 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 PDPK1O15530 556 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 BCAS1O75363 584 aaPredicted RBP14.02□□□□□ -0.16
USP4-203ENST00000415188 PDE9AO76083 593 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 INMTO95050 263 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 GBAP04062 536 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 ZNF182P17025 639 aaPredicted RBP14.02□□□□□ -0.16
USP4-203ENST00000415188 RHCEP18577 417 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 BSGP35613 385 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 KRT20P35900 424 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 FRKP42685 505 aaPredicted RBP14.02□□□□□ -0.16
USP4-203ENST00000415188 GRK6P43250 576 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 XCR1P46094 333 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 MAPK12P53778 367 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 TAS2R38P59533 333 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 KCNC4Q03721 635 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 BNIP3Q12983 259 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 MICAQ29983 383 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 WSCD2Q2TBF2 565 aa14.02□□□□□ -0.16
USP4-203ENST00000415188 CCDC157Q569K6 752 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms