RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZBED6CLQ96FA7 236 aaPredicted RBP12.44□□□□□ -0.42
CNN3-203ENST00000415017 PTCHD1Q96NR3 888 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 TMEM121BQ9BXQ6 578 aaPredicted RBP12.44□□□□□ -0.42
CNN3-203ENST00000415017 ALOXE3Q9BYJ1 711 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 PAIP1Q9H074 479 aaKnown RBP12.44□□□□□ -0.42
CNN3-203ENST00000415017 SIRT3Q9NTG7 399 aaPredicted RBP12.44□□□□□ -0.42
CNN3-203ENST00000415017 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 LEF1Q9UJU2 399 aaPredicted RBP12.44□□□□□ -0.42
CNN3-203ENST00000415017 TCFL5Q9UL49 500 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 MKL2Q9ULH7 1088 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
CNN3-203ENST00000415017 NDUFAF1Q9Y375 327 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 ZNF780BQ9Y6R6 833 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 FRYQ5TBA9 3013 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 ZFHX4Q86UP3 3567 aa12.44□□□□□ -0.42
CNN3-203ENST00000415017 A0A096LPI6 279 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 LOC100653049A0A140TA62 436 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 A0A1W2PRB8 838 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 FXYD1O00168 92 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 NR5A2O00482 541 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 ERAL1O75616 437 aaKnown RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 CDC123O75794 336 aaPredicted RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 KRT34O76011 436 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 UBOX5O94941 541 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 PSMG1O95456 288 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 SPINK2P20155 84 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 PTPN4P29074 926 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 FEN1P39748 380 aaKnown RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 GPR143P51810 404 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 HBA1P69905 142 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 BNIP1Q12981 228 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 SLC13A2Q13183 592 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 DNASE1L3Q13609 305 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 MAPKAPK3Q16644 382 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 ZNF628Q5EBL2 1059 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 EXOSC6Q5RKV6 272 aaKnown RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 FAM180BQ6P0A1 224 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 SLC2A7Q6PXP3 512 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 TMEM64Q6YI46 380 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 DGAT2L6Q6ZPD8 337 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 GPR155Q7Z3F1 870 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 ANKRD37Q7Z713 158 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 MSRB3Q8IXL7 192 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 CCDC116Q8IYX3 515 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 CLECL1Q8IZS7 167 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 POU5F2Q8N7G0 328 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 VPS37AQ8NEZ2 397 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 ADAMTS17Q8TE56 1095 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 PTPMT1Q8WUK0 201 aaPredicted RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 NSL1Q96IY1 281 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 WDR77Q9BQA1 342 aaPredicted RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 PELOQ9BRX2 385 aaKnown RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 SOX17Q9H6I2 414 aaPredicted RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 EPS8L2Q9H6S3 715 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 CXorf21Q9HAI6 301 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 SEMA3GQ9NS98 782 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 SLC6A13Q9NSD5 602 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 TAS2R9Q9NYW1 312 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 SLAMF8Q9P0V8 285 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 GPN3Q9UHW5 284 aaPredicted RBP12.43□□□□□ -0.42
CNN3-203ENST00000415017 C3orf18Q9UK00 162 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 CROTQ9UKG9 612 aa12.43□□□□□ -0.42
CNN3-203ENST00000415017 NCOR2Q9Y618 2525 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 A0A087WV62 115 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 PLOD3O60568 738 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ALOX12BO75342 701 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ERN1O75460 977 aaKnown RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 IGHEP01854 428 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 C8orf89P0DMQ9 161 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 CALB2P22676 271 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 MMP11P24347 488 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 CPOXP36551 454 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 CDKN2CP42773 168 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 EMP2P54851 167 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ID2Q02363 134 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 FUT7Q11130 342 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 STX4Q12846 297 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ELAVL1Q15717 326 aaKnown RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 MINDY4Q4G0A6 757 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 REP15Q6BDI9 236 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ZNF551Q7Z340 670 aaPredicted RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 NFAM1Q8NET5 270 aaPredicted RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 SNIP1Q8TAD8 396 aaKnown RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 HOXB13Q92826 284 aaPredicted RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 GATA6Q92908 595 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ITCHQ96J02 903 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 BBS4Q96RK4 519 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 GPATCH1Q9BRR8 931 aaKnown RBP12.42□□□□□ -0.42
CNN3-203ENST00000415017 INPP5KQ9BT40 448 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 TUBB6Q9BUF5 446 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 YIPF2Q9BWQ6 316 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 CXorf36Q9H7Y0 433 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 RMND5AQ9H871 391 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 NEUROD4Q9HD90 331 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ADAP2Q9NPF8 381 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 GIMAP4Q9NUV9 329 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 MAT2BQ9NZL9 334 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 KCND3Q9UK17 655 aa12.42□□□□□ -0.42
CNN3-203ENST00000415017 ENTPD4Q9Y227 616 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms