RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 RPL13AP3Q6NVV1 102 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM81Q6P7N7 255 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 FAM199XQ6PEV8 388 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM108Q6UXF1 575 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SERPINA13PQ6UXR4 307 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 HSDL2Q6YN16 418 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 C11orf57Q6ZUT1 292 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CENPVQ7Z7K6 275 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM17Q86X19 198 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RALGPS2Q86X27 583 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 DHFR2Q86XF0 187 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TDRPQ86YL5 185 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 FOXP4Q8IVH2 680 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF100Q8IYN0 542 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 FUKQ8N0W3 1084 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 GPC2Q8N158 579 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ARHGAP24Q8N264 748 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ZNF276Q8N554 614 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CERS5Q8N5B7 392 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MFSD9Q8NBP5 474 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NECAP1Q8NC96 275 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 BEND2Q8NDZ0 799 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CCDC54Q8NEL0 328 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PROKR2Q8NFJ6 384 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TSPAN14Q8NG11 270 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 OR5T3Q8NGG3 340 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 OR51L1Q8NGJ5 315 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RHEBL1Q8TAI7 183 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 HM13Q8TCT9 377 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RAET1EQ8TD07 263 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 HOXB13Q92826 284 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SEMA4DQ92854 862 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 P2RX5Q93086 422 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ESAMQ96AP7 390 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SLCO4A1Q96BD0 722 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SPSB1Q96BD6 273 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 KLHL29Q96CT2 875 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 AP2M1Q96CW1 435 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 R3HDM4Q96D70 268 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NSL1Q96IY1 281 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CPB2Q96IY4 423 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CHAMP1Q96JM3 812 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 C4orf36Q96KX1 117 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 C3orf30Q96M34 536 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SERPINB12Q96P63 405 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PPP1R2P1Q96PQ5 205 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PANX3Q96QZ0 392 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 OR5B2Q96R09 309 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SEPT5Q99719 369 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NPAS2Q99743 824 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 EBNA1BP2Q99848 306 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SPAG8Q99932 426 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NIPSNAP1Q9BPW8 284 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 KLHDC3Q9BQ90 382 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MSTO1Q9BUK6 570 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 KIFC1Q9BW19 673 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 DDA1Q9BW61 102 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 YTHDF1Q9BYJ9 559 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CPEB1Q9BZB8 566 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ROPN1BQ9BZX4 212 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ROGDIQ9GZN7 287 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 WWP1Q9H0M0 922 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 OR2AG1Q9H205 316 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SLCO5A1Q9H2Y9 848 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 NELFAQ9H3P2 528 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TOR3AQ9H497 397 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 WDR55Q9H6Y2 383 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SMYD3Q9H7B4 428 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 C10orf88Q9H8K7 445 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 WDR76Q9H967 626 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ANKRA2Q9H9E1 313 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SGK2Q9HBY8 427 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MCCC2Q9HCC0 563 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 HHATLQ9HCP6 504 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 LYRM4Q9HD34 91 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CD209Q9NNX6 404 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 ACSS2Q9NR19 701 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 YAE1D1Q9NRH1 226 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 GSN-AS1Q9NRJ2 163 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CATSPERZQ9NTU4 200 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TMLHEQ9NVH6 421 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TMEM161AQ9NX61 479 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TEX10Q9NXF1 929 aaPredicted RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 USE1Q9NZ43 259 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CCDC59Q9P031 241 aaKnown RBP3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PPP4R1LQ9P1A2 415 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 HEY2Q9UBP5 337 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 UPB1Q9UBR1 384 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 IKZF3Q9UKT9 509 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 CNTN6Q9UQ52 1028 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 TESMINQ9Y4I5 508 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 RIPK3Q9Y572 518 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 MMP24Q9Y5R2 645 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 SALL1Q9NSC2 1324 aa3.43□□□□□ -1.86
SF3B1-203ENST00000414174 PLEKHH1Q9ULM0 1364 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 A0A087X1B8 175 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 TCRBV5S4A2TA0A5A2 114 aa3.42□□□□□ -1.86
SF3B1-203ENST00000414174 PRSS38A1L453 326 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms