RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LIX1Q8N485 282 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 SNX31Q8N9S9 440 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 FAM13CQ8NE31 585 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 FBXO36Q8NEA4 188 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 OR7G3Q8NG95 312 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 MBD3L2Q8NHZ7 208 aaPredicted RBP11.14□□□□□ -0.63
LIMS2-210ENST00000413578 LINC01560Q8TB33 94 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 TANKQ92844 425 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 LRRC46Q96FV0 321 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 RBM18Q96H35 190 aaKnown RBP11.14□□□□□ -0.63
LIMS2-210ENST00000413578 DOHHQ9BU89 302 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 SORBS1Q9BX66 1292 aaKnown RBP11.14□□□□□ -0.63
LIMS2-210ENST00000413578 ZNF717Q9BY31 904 aaPredicted RBP11.14□□□□□ -0.63
LIMS2-210ENST00000413578 PHACTR1Q9C0D0 580 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 CAB39LQ9H9S4 337 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.14□□□□□ -0.63
LIMS2-210ENST00000413578 MS4A12Q9NXJ0 267 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 MTO1Q9Y2Z2 717 aaKnown RBP11.14□□□□□ -0.63
LIMS2-210ENST00000413578 EML6Q6ZMW3 1958 aa11.14□□□□□ -0.63
LIMS2-210ENST00000413578 C15orf38-AP3S2A0A0A6YYH1 394 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 OR6C76A6NM76 312 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 CLCA1A8K7I4 914 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SAP18O00422 153 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SH3BGRLO75368 114 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 PRKRAO75569 313 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 PIAS1O75925 651 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SEC31AO94979 1220 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 IL18BPO95998 194 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 TGFB1P01137 390 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 IL2RAP01589 272 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 INHBBP09529 407 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 CCDC166P0CW27 439 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 GDF1P27539 372 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SERPINB1P30740 379 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 HNRNPH2P55795 449 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ARL4CP56559 192 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ATP6V0D1P61421 351 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 HERVK_113P63132 956 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ERVK-8P63133 956 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ILF2Q12905 390 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SLAMF1Q13291 335 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 KEAP1Q14145 624 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 RPS6KA2Q15349 733 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 HIST2H2ACQ16777 129 aaPredicted RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 AP5B1Q2VPB7 878 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 DCST1Q5T197 706 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 C18orf63Q68DL7 685 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 BICRALQ6AI39 1079 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 HIST2H2AA3Q6FI13 130 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 OR4C11Q6IEV9 310 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 MRM1Q6IN84 353 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 CHSY3Q70JA7 882 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 LRRC70Q7Z2Q7 622 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 CXorf67Q86X51 503 aaPredicted RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 KIF18BQ86Y91 864 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ANKMY2Q8IV38 441 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 PM20D2Q8IYS1 436 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 RNF175Q8N4F7 328 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SPPL2AQ8TCT8 520 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 DOK4Q8TEW6 326 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 UBE2E3Q969T4 207 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 HSPBAP1Q96EW2 488 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 WDYHV1Q96HA8 205 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 UBXN10Q96LJ8 280 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ZNF597Q96LX8 424 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 GAL3ST4Q96RP7 486 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SECISBP2Q96T21 854 aaKnown RBP11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ERVK-6Q9BXR3 956 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ANGPTL4Q9BY76 406 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 CD244Q9BZW8 370 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 OR51B5Q9H339 312 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 NSMCE4AQ9NXX6 385 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 ERVK-19Q9WJR5 959 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 C15orf41Q9Y2V0 281 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 TSC22D4Q9Y3Q8 395 aa11.13□□□□□ -0.63
LIMS2-210ENST00000413578 NCKAP5O14513 1909 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 IQANK1A0A1B0GTG1 560 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 WASHC1A8K0Z3 465 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 PLPP1O14494 284 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 PHGDHO43175 533 aaKnown RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 DYRK3O43781 588 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 CCNT2O60583 730 aaKnown RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 BMP7P18075 431 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 CTSSP25774 331 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 ARFIP1P53367 373 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 DCAF7P61962 342 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 TMEM198Q66K66 360 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 MED27Q6P2C8 311 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 TMEM64Q6YI46 380 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 RNF111Q6ZNA4 994 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 SYDE1Q6ZW31 735 aaPredicted RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
LIMS2-210ENST00000413578 SLC29A4Q7RTT9 530 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 ADGRE4PQ86SQ3 457 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 GPR180Q86V85 440 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 SLC35F6Q8N357 371 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 UBTD2Q8WUN7 234 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 DIO2Q92813 273 aa11.12□□□□□ -0.63
LIMS2-210ENST00000413578 TP53INP1Q96A56 240 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms