RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 BLOC1S3Q6QNY0 202 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 DYNC2LI1Q8TCX1 351 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ADAMTS15Q8TE58 950 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 KCNC2Q96PR1 638 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SRMSQ9H3Y6 488 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 RGCCQ9H4X1 137 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 FBXL12Q9NXK8 326 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MYH15Q9Y2K3 1946 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MTX2O75431 263 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 CLDN7O95471 211 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 TFP02787 698 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 HNRNPA1P09651 372 aaKnown RBP eCLIP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SHMT2P34897 504 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 CDNFQ49AH0 187 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ENPP7Q6UWV6 458 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MARCH9Q86YJ5 346 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ZDHHC14Q8IZN3 488 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 WDTC1Q8N5D0 677 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ARMC5Q96C12 935 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SLC2A13Q96QE2 648 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 STRA6Q9BX79 667 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 HAPLN2Q9GZV7 340 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ARNT2Q9HBZ2 717 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SLC17A6Q9P2U8 582 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 GNG8Q9UK08 70 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF487B1APH4 448 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 HOXB2P14652 356 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 CBLP22681 906 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MMP12P39900 470 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 EIF2S3P41091 472 aaKnown RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MCCD1P59942 119 aaPredicted RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 GRIK2Q13002 908 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SLAMF1Q13291 335 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ITPRIPL2Q3MIP1 535 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SYT6Q5T7P8 510 aaPredicted RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 PDE12Q6L8Q7 609 aaKnown RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 LINGO2Q7L985 606 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 ZSWIM9Q86XI8 627 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 C12orf76Q8N812 135 aaPredicted RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SNIP1Q8TAD8 396 aaKnown RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 C2CD4CQ8TF44 421 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 SHDQ96IW2 340 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 OPA3Q9H6K4 179 aa8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MRM3Q9HC36 420 aaKnown RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 MYEF2Q9P2K5 600 aaKnown RBP8.15□□□□□ -1.1
PBRM1-209ENST00000412587 DLX3O60479 287 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF30P17039 623 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 KEAP1Q14145 624 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 COQ5Q5HYK3 327 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 CXorf57Q6NSI4 855 aaKnown RBP8.15□□□□□ -1.11
PBRM1-209ENST00000412587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.15□□□□□ -1.11
PBRM1-209ENST00000412587 MRPL10Q7Z7H8 261 aaKnown RBP8.15□□□□□ -1.11
PBRM1-209ENST00000412587 ZER1Q7Z7L7 766 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 ENTHD1Q8IYW4 607 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 OR52L1Q8NGH7 329 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.15□□□□□ -1.111e-7■■■■■ 43.8
PBRM1-209ENST00000412587 XAGE5Q8WWM1 108 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 PYURFQ96I23 114 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 TMEM74Q96NL1 305 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 NECTIN4Q96NY8 510 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 SORBS1Q9BX66 1292 aaKnown RBP8.15□□□□□ -1.11
PBRM1-209ENST00000412587 BRINP2Q9C0B6 783 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 LMAN2LQ9H0V9 348 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 OR51E2Q9H255 320 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 C11orf16Q9NQ32 467 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 C1orf109Q9NX04 203 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 THUMPD1Q9NXG2 353 aaKnown RBP8.15□□□□□ -1.11
PBRM1-209ENST00000412587 ZIM2Q9NZV7 527 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 HEBP2Q9Y5Z4 205 aa8.15□□□□□ -1.11
PBRM1-209ENST00000412587 MYH7P12883 1935 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 A0A0D9SEW6 157 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF840PA6NDX5 716 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 MROH6A6NGR9 719 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 POM121CA8CG34 1229 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 RFXAPO00287 272 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 NME4O00746 187 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 CLDN4O14493 209 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 PRKYO43930 277 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 CREBL2O60519 120 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-209ENST00000412587 EPOP01588 193 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 RB1P06400 928 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 PRPS2P11908 318 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 POU2F1P14859 743 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 EXOSC2Q13868 293 aaKnown RBP8.14□□□□□ -1.11
PBRM1-209ENST00000412587 MINDY4Q4G0A6 757 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 EOGTQ5NDL2 527 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 CST9Q5W186 159 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 SLC25A25Q6KCM7 469 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 RPL13AP3Q6NVV1 102 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 GPRIN1Q7Z2K8 1008 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 ADGRG2Q8IZP9 1017 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 BTBD1Q9H0C5 482 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 C11orf54Q9H0W9 315 aaPredicted RBP8.14□□□□□ -1.11
PBRM1-209ENST00000412587 SLC38A1Q9H2H9 487 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 TMEM185BQ9H7F4 350 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 EQTNQ9NQ60 294 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 SLC2A6Q9UGQ3 507 aa8.14□□□□□ -1.11
PBRM1-209ENST00000412587 NEMP2A6NFY4 417 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms