RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 RIT1Q92963 219 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 ACPTQ9BZG2 426 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 COPS7AQ9UBW8 275 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 ERVK-11Q9UQG0 969 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 PCDHA9Q9Y5H5 950 aa17.63■□□□□ 0.41
SF3A1-202ENST00000411423 EML6Q6ZMW3 1958 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 A0A1B0GUH1 482 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 HS6ST1O60243 411 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 OR10H2O60403 315 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 CCL3P10147 92 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 KRT15P19012 456 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 MAPK12P53778 367 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 HMGCS1Q01581 520 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 LCP2Q13094 533 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 BIKQ13323 160 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 EBPQ15125 230 aaKnown RBP17.62■□□□□ 0.41
SF3A1-202ENST00000411423 MPEG1Q2M385 716 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF791Q3KP31 576 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-202ENST00000411423 CMPK2Q5EBM0 449 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 Q6ZPB1 254 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-202ENST00000411423 GPALPP1Q8IXQ4 340 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 CCNYL1Q8N7R7 359 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 OR52N2Q8NGI0 321 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 METTL6Q8TCB7 284 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 APIPQ96GX9 242 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 CCDC120Q96HB5 630 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 WDR41Q9HAD4 459 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 CXorf21Q9HAI6 301 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 SH2D2AQ9NP31 389 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 TIMMDC1Q9NPL8 285 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 AHSPQ9NZD4 102 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 HEY2Q9UBP5 337 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 VPS29Q9UBQ0 182 aa17.62■□□□□ 0.41
SF3A1-202ENST00000411423 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF3A1-202ENST00000411423 V9GYY5 206 aaPredicted RBP17.62■□□□□ 0.41
SF3A1-202ENST00000411423 SPTBN1Q01082 2364 aaKnown RBP17.61■□□□□ 0.41
SF3A1-202ENST00000411423 KLRC4-KLRK1H3BQV0 150 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 MLYCDO95822 493 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 MYL2P10916 166 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 GALNSP34059 522 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 CRHR1P34998 444 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 XKP51811 444 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 SLC18A2Q05940 514 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 KRTCAP3Q53RY4 240 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF787Q6DD87 383 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 SLC48A1Q6P1K1 146 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 PAGE2Q7Z2X7 111 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 SPPL2CQ8IUH8 684 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF441Q8N8Z8 693 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 SIMC1Q8NDZ2 872 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 OR2M7Q8NG81 312 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 OR4K14Q8NGD5 310 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 OR5L2Q8NGL0 311 aa17.61■□□□□ 0.41
SF3A1-202ENST00000411423 PELOQ9BRX2 385 aaKnown RBP17.61■□□□□ 0.41
SF3A1-202ENST00000411423 CCL21O00585 134 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 ESRRBO95718 433 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 KRT6AP02538 564 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 KRT6BP04259 564 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 HSD3B1P14060 373 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 KRT4P19013 534 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 S1PR1P21453 382 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 HSD3B2P26439 372 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 PIK3R1P27986 724 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 HMOX2P30519 316 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 KRT6CP48668 564 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 NAGLUP54802 743 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 PKNOX1P55347 436 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 ADORA2A-AS1P86434 159 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 MGAT2Q10469 447 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 CSTF3Q12996 717 aaKnown RBP17.6■□□□□ 0.41
SF3A1-202ENST00000411423 DUSP8Q13202 625 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 RNF111Q6ZNA4 994 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 ZNF615Q8N8J6 731 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 POGLUT1Q8NBL1 392 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 C7orf57Q8NEG2 295 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 AENQ8WTP8 325 aaKnown RBP17.6■□□□□ 0.41
SF3A1-202ENST00000411423 ITLN2Q8WWU7 325 aaPredicted RBP17.6■□□□□ 0.41
SF3A1-202ENST00000411423 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.6■□□□□ 0.41
SF3A1-202ENST00000411423 C11orf24Q96F05 449 aaPredicted RBP17.6■□□□□ 0.41
SF3A1-202ENST00000411423 ART5Q96L15 291 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 GAL3ST4Q96RP7 486 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 WWTR1Q9GZV5 400 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 PROK2Q9HC23 129 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 MID1IP1Q9NPA3 183 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 DTX4Q9Y2E6 619 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 HRH3Q9Y5N1 445 aa17.6■□□□□ 0.41
SF3A1-202ENST00000411423 DIDO1Q9BTC0 2240 aaKnown RBP17.59■□□□□ 0.41
SF3A1-202ENST00000411423 TFECO14948 347 aaPredicted RBP17.59■□□□□ 0.41
SF3A1-202ENST00000411423 ULK1O75385 1050 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 CPMP14384 443 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 SERPINB3P29508 390 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 PIGAP37287 484 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 FEN1P39748 380 aaKnown RBP17.59■□□□□ 0.41
SF3A1-202ENST00000411423 DNASE1L1P49184 302 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 RBPJQ06330 500 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 FUT7Q11130 342 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 PRSS53Q2L4Q9 553 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 FAM111BQ6SJ93 734 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 TMEM64Q6YI46 380 aa17.59■□□□□ 0.41
SF3A1-202ENST00000411423 RTL4Q6ZR62 310 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms