RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DEF8Q6ZN54 512 aa15.04■□□□□ -0
HOXD3-202ENST00000410016 CLIP4Q8N3C7 705 aa15.04■□□□□ -0
HOXD3-202ENST00000410016 TBC1D19Q8N5T2 526 aa15.04■□□□□ -0
HOXD3-202ENST00000410016 TP53I13Q8NBR0 393 aaPredicted RBP15.04■□□□□ -0
HOXD3-202ENST00000410016 ST13P5Q8NFI4 369 aaPredicted RBP15.04■□□□□ -0
HOXD3-202ENST00000410016 TRNT1Q96Q11 434 aaKnown RBP15.04■□□□□ -0
HOXD3-202ENST00000410016 PITHD1Q9GZP4 211 aaPredicted RBP15.04■□□□□ -0
HOXD3-202ENST00000410016 MVB12BQ9H7P6 319 aa15.04■□□□□ -0
HOXD3-202ENST00000410016 ADAM29Q9UKF5 820 aa15.04■□□□□ -0
HOXD3-202ENST00000410016 HCN2Q9UL51 889 aa15.04■□□□□ -0
HOXD3-202ENST00000410016 GPC6Q9Y625 555 aaPredicted RBP15.04■□□□□ -0
HOXD3-202ENST00000410016 KIF26AQ9ULI4 1882 aaPredicted RBP15.04■□□□□ -0
HOXD3-202ENST00000410016 IGKV1-8A0A0C4DH67 115 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 IGLON5A6NGN9 336 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 NDUFS4O43181 175 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 OR1F1O43749 312 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 KCNK2O95069 426 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 RPN2P04844 631 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 PCCBP05166 539 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 OR12D1P0DN82 309 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 DDX5P17844 614 aaKnown RBP15.03■□□□□ -0
HOXD3-202ENST00000410016 IL12RB1P42701 662 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 CSNK1G2P78368 415 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 PIN1Q13526 163 aaPredicted RBP15.03■□□□□ -0
HOXD3-202ENST00000410016 NCF4Q15080 339 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 CCDC190Q86UF4 302 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 POC5Q8NA72 575 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 HTRA1Q92743 480 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 ZNF607Q96SK3 696 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 GLIPR2Q9H4G4 154 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 PRSS16Q9NQE7 514 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 DNAJC27Q9NZQ0 273 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 SEC14L3Q9UDX4 400 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 CFL2Q9Y281 166 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 WDR37Q9Y2I8 494 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 COL4A3Q01955 1670 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 A0A0A6YYD5 115 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 HAT1O14929 419 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 SLITRK5O94991 958 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 NFATC1O95644 943 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 CSTF2P33240 577 aaKnown RBP eCLIP15.03■□□□□ -0
HOXD3-202ENST00000410016 GSTM5P46439 218 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 XKP51811 444 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 MEDAGQ5VYS4 303 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 OR4C11Q6IEV9 310 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 OR5D16Q8NGK9 328 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 CREB3L4Q8TEY5 395 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 RASSF5Q8WWW0 418 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 RAB7BQ96AH8 199 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 POLR2J3Q9H1A7 115 aaKnown RBP15.03■□□□□ -0
HOXD3-202ENST00000410016 SEMA3GQ9NS98 782 aa15.03■□□□□ -0
HOXD3-202ENST00000410016 CAB39Q9Y376 341 aaPredicted RBP15.03■□□□□ -0
HOXD3-202ENST00000410016 DNMT3AQ9Y6K1 912 aaPredicted RBP15.03■□□□□ -0
HOXD3-202ENST00000410016 NUP210Q8TEM1 1887 aaPredicted RBP15.03■□□□□ -0
HOXD3-202ENST00000410016 A0A0G2JN53 185 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 A0A1W2PRQ8 180 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 CTDSP2O14595 271 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 SLC28A2O43868 658 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 SH3BP5O60239 455 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 SNX4O95219 450 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 CKMT1AP12532 417 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 CLCNKAP51800 687 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 TAS2R38P59533 333 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 TARDBPQ13148 414 aaKnown RBP eCLIP15.02■□□□□ -0
HOXD3-202ENST00000410016 SELENBP1Q13228 472 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 KIAA1161Q6NSJ0 714 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 BCDIN3DQ7Z5W3 292 aaKnown RBP15.02■□□□□ -0
HOXD3-202ENST00000410016 OR8J1Q8NGP2 316 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 XAGE5Q8WWM1 108 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 KLHL6Q8WZ60 621 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 AMDHD1Q96NU7 426 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 SDHCQ99643 169 aaPredicted RBP15.02■□□□□ -0
HOXD3-202ENST00000410016 DPH7Q9BTV6 452 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 OR51I1Q9H343 314 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 MKLN1Q9UL63 735 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 PCDHGB6Q9Y5F9 930 aa15.02■□□□□ -0
HOXD3-202ENST00000410016 LRIT2A6NDA9 550 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 H3BN98 237 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 KDM1AO60341 852 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 MED26O95402 600 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 EPPINO95925 133 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 SPNP16150 400 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 ENDOUP21128 410 aaKnown RBP15.02□□□□□ -0.01
HOXD3-202ENST00000410016 DRD3P35462 400 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 SOX6P35712 828 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 MLF2Q15773 248 aaPredicted RBP15.02□□□□□ -0.01
HOXD3-202ENST00000410016 ZNF793Q6ZN11 406 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 C12orf76Q8N812 135 aaPredicted RBP15.02□□□□□ -0.01
HOXD3-202ENST00000410016 TMEM80Q96HE8 168 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 MIR1-1HGQ9H1L0 117 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 P2RX2Q9UBL9 471 aa15.02□□□□□ -0.01
HOXD3-202ENST00000410016 C1QTNF3-AMACRE9PGA6 284 aa15.01□□□□□ -0.01
HOXD3-202ENST00000410016 CSO75390 466 aaKnown RBP15.01□□□□□ -0.01
HOXD3-202ENST00000410016 PTTG1O95997 202 aa15.01□□□□□ -0.01
HOXD3-202ENST00000410016 HBQ1P09105 142 aa15.01□□□□□ -0.01
HOXD3-202ENST00000410016 SOX3P41225 446 aa15.01□□□□□ -0.01
HOXD3-202ENST00000410016 TRA2BP62995 288 aaKnown RBP15.01□□□□□ -0.01
HOXD3-202ENST00000410016 LSM11P83369 360 aaKnown RBP eCLIP15.01□□□□□ -0.01
HOXD3-202ENST00000410016 PRDX1Q06830 199 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms