RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TGFB1P01137 390 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PRKCGP05129 697 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FAM90A13PP0C7W8 464 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FAM90A24PP0C7X0 464 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PCNAP12004 261 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ANPEPP15144 967 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PNLIPP16233 465 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF23P17027 643 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF3P17036 446 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 TNFRSF1AP19438 455 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ITIH1P19827 911 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 JAK1P23458 1154 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RBL1P28749 1068 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 TYK2P29597 1187 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 MAT2AP31153 395 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CNR2P34972 360 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RCVRNP35243 200 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PTGS2P35354 604 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CDKN2BP42772 138 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 HCAR3P49019 387 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CLK3P49761 638 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PGDP52209 483 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PRKAG1P54619 331 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 HADHBP55084 474 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 F2RL1P55085 397 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 C21orf59P57076 290 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RPL15P61313 204 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 IRX4P78413 519 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SEMG2Q02383 582 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF33AQ06730 810 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF33BQ06732 778 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RIPPLY1Q0D2K3 151 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 BAMBIQ13145 260 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 DUSP8Q13202 625 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SELPLGQ14242 412 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF235Q14590 738 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 POU6F1Q14863 301 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PAFAH1B3Q15102 231 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PDK2Q15119 407 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PDK3Q15120 406 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 TRMT5Q32P41 509 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PTCHD3Q3KNS1 767 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 Q3ZCU0 254 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FASTKD1Q53R41 847 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CARD16Q5EG05 197 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ATAD3BQ5T9A4 648 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PIP5KL1Q5T9C9 394 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 LRRC38Q5VT99 294 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 AGBL4Q5VU57 503 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SLC9A4Q6AI14 798 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 OR7E24Q6IFN5 339 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CGB2Q6NT52 195 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 IZUMO2Q6UXV1 221 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 LIPIQ6XZB0 460 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KYAT3Q6YP21 454 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PPP1R32Q7Z5V6 425 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CENPVQ7Z7K6 275 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PRUNE1Q86TP1 453 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 NT5DC3Q86UY8 548 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZSWIM9Q86XI8 627 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CAMK1DQ8IU85 385 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 P3H2Q8IVL5 708 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 DDIASQ8IXT1 998 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PM20D2Q8IYS1 436 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 BCL6BQ8N143 479 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PGBD5Q8N414 524 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZCCHC9Q8N567 271 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SIRT6Q8N6T7 355 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF680Q8NEM1 530 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 OR2AP1Q8NGE2 309 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF420Q8TAQ5 688 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SUN3Q8TAQ9 357 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SLC22A8Q8TCC7 542 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KAT2AQ92830 837 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KLK6Q92876 244 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SLAMF9Q96A28 289 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PTCD3Q96EY7 689 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SLC47A1Q96FL8 570 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 PRR11Q96HE9 360 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FAM46AQ96IP4 442 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 MAGEB18Q96M61 343 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KLHL32Q96NJ5 620 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SERPINB12Q96P63 405 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RNF157Q96PX1 679 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 KRT12Q99456 494 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 LGMNQ99538 433 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 OMDQ99983 421 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 BTBD10Q9BSF8 475 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 EDEM2Q9BV94 578 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CINPQ9BW66 212 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 C1QTNF7Q9BXJ2 289 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 CADM1Q9BY67 442 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 OSBPL8Q9BZF1 889 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 GORASP2Q9H8Y8 452 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 NT5MQ9NPB1 228 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 FZD3Q9NPG1 666 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 RPRD1BQ9NQG5 326 aaKnown RBP4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SDHAF3Q9NRP4 125 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 SEMA4GQ9NTN9 838 aa4.34□□□□□ -1.71
SF3B1-202ENST00000409915 C20orf141Q9NUB4 165 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms