RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 PDGFAP04085 211 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ALPPP05187 535 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 LBPP18428 481 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 TNNI3P19429 210 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 SOX18P35713 384 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ALDH9A1P49189 494 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 MGAT2Q10469 447 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 FUT7Q11130 342 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 MAP4K2Q12851 820 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 PRSS53Q2L4Q9 553 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 PRICKLE4Q2TBC4 344 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 CROCCQ5TZA2 2017 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ISLR2Q6UXK2 745 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 MAVSQ7Z434 540 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 CPAMD8Q8IZJ3 1885 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 SLC2A12Q8TD20 617 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ACTRT2Q8TDY3 377 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 RIT1Q92963 219 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 NCLNQ969V3 563 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 PPWD1Q96BP3 646 aaKnown RBP13.77□□□□□ -0.21
SUMO1-207ENST00000409498 CTHRC1Q96CG8 243 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 FBXL20Q96IG2 436 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 BBC3Q96PG8 261 aaPredicted RBP13.77□□□□□ -0.21
SUMO1-207ENST00000409498 CCDC134Q9H6E4 229 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 REEP4Q9H6H4 257 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 NOP53Q9NZM5 478 aaKnown RBP13.77□□□□□ -0.21
SUMO1-207ENST00000409498 BAIAP2L1Q9UHR4 511 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ATP6V1HQ9UI12 483 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ZNF639Q9UID6 485 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 EIF3LQ9Y262 564 aaKnown RBP13.77□□□□□ -0.21
SUMO1-207ENST00000409498 ZNF780BQ9Y6R6 833 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 BSNQ9UPA5 3926 aa13.77□□□□□ -0.21
SUMO1-207ENST00000409498 MYOCOSA0A1B0GUC4 107 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 K7EM74 188 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 DYRK3O43781 588 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 OR10H2O60403 315 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 ERAL1O75616 437 aaKnown RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 IFI6P09912 130 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 KITP10721 976 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 RPL3P39023 403 aaKnown RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 FRKP42685 505 aaPredicted RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 PGDP52209 483 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 CLDN8P56748 225 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 DUSP2Q05923 314 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 MFAP5Q13361 173 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 LY6DQ14210 128 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 LACTB2Q53H82 288 aaPredicted RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 EPGNQ6UW88 154 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 R3HCC1LQ7Z5L2 792 aaKnown RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 TICAM1Q8IUC6 712 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 RIMKLAQ8IXN7 391 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 FAM9CQ8IZT9 166 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 LRRC25Q8N386 305 aaPredicted RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 LIX1Q8N485 282 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 SUN3Q8TAQ9 357 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 ZNF675Q8TD23 568 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 ERP27Q96DN0 273 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 SENP5Q96HI0 755 aaPredicted RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 ZNF354BQ96LW1 612 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 TSSK3Q96PN8 268 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 NPAS2Q99743 824 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 RNF32Q9H0A6 362 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 KCNK13Q9HB14 408 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 MIEF1Q9NQG6 463 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 MARCOQ9UEW3 520 aaPredicted RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 MAPRE3Q9UPY8 281 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 TP53TG5Q9Y2B4 290 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 USH1CQ9Y6N9 552 aa13.76□□□□□ -0.21
SUMO1-207ENST00000409498 TNRC6AQ8NDV7 1962 aaKnown RBP13.76□□□□□ -0.21
SUMO1-207ENST00000409498 TMEM200CA6NKL6 621 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 GABRR3A8MPY1 467 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 EDF1O60869 148 aaKnown RBP13.75□□□□□ -0.21
SUMO1-207ENST00000409498 SLITRK5O94991 958 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 CLPSP04118 112 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 CT62P0C5K7 136 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 G6PDP11413 515 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 DDX5P17844 614 aaKnown RBP13.75□□□□□ -0.21
SUMO1-207ENST00000409498 S1PR1P21453 382 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 MPIP34949 423 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 FEN1P39748 380 aaKnown RBP13.75□□□□□ -0.21
SUMO1-207ENST00000409498 MEP1AQ16819 746 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 ZNF750Q32MQ0 723 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 SOWAHCQ53LP3 525 aaPredicted RBP13.75□□□□□ -0.21
SUMO1-207ENST00000409498 SPATA19Q7Z5L4 167 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 CAMKMTQ7Z624 323 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 RPS19BP1Q86WX3 136 aaKnown RBP13.75□□□□□ -0.21
SUMO1-207ENST00000409498 GALNT12Q8IXK2 581 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 KIF2BQ8N4N8 673 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 SLC5A8Q8N695 610 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 NATD1Q8N6N6 113 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 OR7G1Q8NGA0 311 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 NUBPLQ8TB37 319 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 TM9SF4Q92544 642 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 HAS2Q92819 552 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 EXOSC8Q96B26 276 aaKnown RBP13.75□□□□□ -0.21
SUMO1-207ENST00000409498 COQ8BQ96D53 544 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 PPP1R36Q96LQ0 422 aa13.75□□□□□ -0.21
SUMO1-207ENST00000409498 C1orf50Q9BV19 199 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms