RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 SLC6A12P48065 614 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 HNMTP50135 292 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 FBXW4P57775 412 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 HERVK_113P63132 956 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ERVK-8P63133 956 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 IGLV3-21P80748 117 aaPredicted RBP15.22■□□□□ 0.03
CHMP3-203ENST00000409225 FNDC7Q5VTL7 733 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 FAM45BPQ6NSW5 357 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 PLXDC2Q6UX71 529 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 UBE3DQ7Z6J8 389 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ACOT4Q8N9L9 421 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 FAM45AQ8TCE6 357 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 NTNG2Q96CW9 530 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 RBM18Q96H35 190 aaKnown RBP15.22■□□□□ 0.03
CHMP3-203ENST00000409225 PDLIM5Q96HC4 596 aaKnown RBP15.22■□□□□ 0.03
CHMP3-203ENST00000409225 FBXL20Q96IG2 436 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 TUBA1CQ9BQE3 449 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ERVK-6Q9BXR3 956 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ROGDIQ9GZN7 287 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ZNF490Q9ULM2 529 aaPredicted RBP15.22■□□□□ 0.03
CHMP3-203ENST00000409225 ERVK-19Q9WJR5 959 aa15.22■□□□□ 0.03
CHMP3-203ENST00000409225 NCF1BA6NI72 391 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 NCF1CA8MVU1 366 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 CLGNO14967 610 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 SNPHO15079 494 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 CTIFO43310 598 aaKnown RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 SH3BGRLO75368 114 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 NCF1P14598 390 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 PTH2RP49190 550 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 NAGLUP54802 743 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 CDKL1Q00532 357 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 PLIN5Q00G26 463 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 ZNF267Q14586 743 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 HMBOX1Q6NT76 420 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 TTC27Q6P3X3 843 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 RNF111Q6ZNA4 994 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 FRA10AC1Q70Z53 315 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 YRDCQ86U90 279 aaKnown RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 PACS2Q86VP3 889 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 CNTN4Q8IWV2 1026 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 GCNT2Q8N0V5 402 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 TAGAPQ8N103 731 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 ZPLD1Q8TCW7 415 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 TBCDQ9BTW9 1192 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 PITHD1Q9GZP4 211 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 PPANQ9NQ55 473 aaKnown RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 TEX10Q9NXF1 929 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-203ENST00000409225 KLHL28Q9NXS3 571 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 OARD1Q9Y530 152 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 IKBKGQ9Y6K9 419 aa15.21■□□□□ 0.03
CHMP3-203ENST00000409225 NBEAL1Q6ZS30 2694 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 SONP18583 2426 aaKnown RBP15.2■□□□□ 0.02
CHMP3-203ENST00000409225 H0Y3Z8 333 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 GNB5O14775 395 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 PRAMEF4O60810 478 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 BANF1O75531 89 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 RCBTB2O95199 551 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 SNX4O95219 450 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 DIO3P55073 304 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 SRYQ05066 204 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 EBPQ15125 230 aaKnown RBP15.2■□□□□ 0.02
CHMP3-203ENST00000409225 RPS6KA2Q15349 733 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 PRAMEF9Q5VWM5 478 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 ZNF441Q8N8Z8 693 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 NAT8LQ8N9F0 302 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 BBOF1Q8ND07 529 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 C7orf57Q8NEG2 295 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 SPPL2AQ8TCT8 520 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 RHBDF1Q96CC6 855 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 ZFP3Q96NJ6 502 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 TM9SF2Q99805 663 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 ANGPTL4Q9BY76 406 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 GSX2Q9BZM3 304 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 PIGMQ9H3S5 423 aa15.2■□□□□ 0.02
CHMP3-203ENST00000409225 MED12Q93074 2177 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 CAPN14A8MX76 684 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 A8MXE2 369 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 ALOX15P16050 662 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 ZNF37AP17032 561 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 HIST1H1TP22492 207 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SSR2P43308 183 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SLC37A1P57057 533 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 KRTAP1-1Q07627 177 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 FAM27E3Q08E93 113 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 DOC2AQ14183 400 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 ZNF460Q14592 562 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 TSNQ15631 228 aaKnown RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 FBXO48Q5FWF7 155 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SPANXN3Q5MJ09 141 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 C20orf204Q6ZNR8 217 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 GALNT7Q86SF2 657 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SNX31Q8N9S9 440 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SRFBP1Q8NEF9 429 aaKnown RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 FAM83FQ8NEG4 500 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 CERS2Q96G23 380 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SECISBP2Q96T21 854 aaKnown RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 KRT12Q99456 494 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 PIGQQ9BRB3 760 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 CAPS2Q9BXY5 557 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms