RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PRR5P85299 388 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 KCNAB2Q13303 367 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 LAPTM4AQ15012 233 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 GPR19Q15760 415 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 ZC3H12BQ5HYM0 836 aaKnown RBP17.88■□□□□ 0.45
USP39-202ENST00000409025 TMEM107Q6UX40 140 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 XAGE5Q8WWM1 108 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 C10orf90Q96M02 699 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 TRAPPC9Q96Q05 1148 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 LYRM4Q9HD34 91 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 PRDM9Q9NQV7 894 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 SIT1Q9Y3P8 196 aa17.88■□□□□ 0.45
USP39-202ENST00000409025 PRUNE2Q8WUY3 3088 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 A0A1B0GTW7 788 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 A0A1W2PS29 197 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 AQP9O43315 295 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 TFAP2AP05549 437 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 ST6GAL1P15907 406 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 BCKDHBP21953 392 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 PPP2R1BP30154 601 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 PTGER1P34995 402 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 VSX2P58304 361 aaPredicted RBP17.87■□□□□ 0.45
USP39-202ENST00000409025 SIM2Q14190 667 aaPredicted RBP17.87■□□□□ 0.45
USP39-202ENST00000409025 PRPF38BQ5VTL8 546 aaKnown RBP17.87■□□□□ 0.45
USP39-202ENST00000409025 TSEN54Q7Z6J9 526 aaKnown RBP17.87■□□□□ 0.45
USP39-202ENST00000409025 TMEFF1Q8IYR6 380 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 OR4K14Q8NGD5 310 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 OR9A2Q8NGT5 310 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 C1orf216Q8TAB5 229 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 ZNF300Q96RE9 604 aaPredicted RBP17.87■□□□□ 0.45
USP39-202ENST00000409025 ZNF607Q96SK3 696 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 SLC38A3Q99624 504 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 AMBRA1Q9C0C7 1298 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 CXorf56Q9H5V9 222 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 PRDM6Q9NQX0 595 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 MRPS2Q9Y399 296 aaKnown RBP17.87■□□□□ 0.45
USP39-202ENST00000409025 SPACA6W5XKT8 324 aa17.87■□□□□ 0.45
USP39-202ENST00000409025 DCNP07585 359 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 NR2F1P10589 423 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 TPD52P55327 224 aaPredicted RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 MAPK11Q15759 364 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 FOXB2Q5VYV0 432 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 GPR153Q6NV75 609 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 C8orf59Q8N0T1 100 aaPredicted RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 LRRC25Q8N386 305 aaPredicted RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 SDR16C5Q8N3Y7 309 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 C19orf47Q8N9M1 422 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 OR5D16Q8NGK9 328 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 ELP4Q96EB1 424 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 YTHDF1Q9BYJ9 559 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 DNAAF2Q9NVR5 837 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 KIF17Q9P2E2 1029 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 SH3GLB1Q9Y371 365 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 TESMINQ9Y4I5 508 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 SLC22A7Q9Y694 548 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 LILRA5A6NI73 299 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 K7ESF4 209 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 TNFRSF11BO00300 401 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 HMGN2P05204 90 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 PROS1P07225 676 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 DAPP51397 102 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 NR1H2P55055 460 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 OLR1P78380 273 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 LASP1Q14847 261 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 KDM4DQ6B0I6 523 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 THAP5Q7Z6K1 395 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 CYP4Z1Q86W10 505 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 NUP43Q8NFH3 380 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 RASSF5Q8WWW0 418 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 CSF3RQ99062 836 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 ING2Q9H160 280 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 IL21RQ9HBE5 538 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 EXD2Q9NVH0 621 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 NDUFA13Q9P0J0 144 aa17.86■□□□□ 0.45
USP39-202ENST00000409025 FAM32AQ9Y421 112 aaKnown RBP17.86■□□□□ 0.45
USP39-202ENST00000409025 LOC100130705A0A1B0GUX0 176 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 ZNF860A6NHJ4 632 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 LMO7DNF2Z398 122 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 SERPINB7O75635 380 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 MFN2O95140 757 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 PABPC4LP0CB38 370 aaKnown RBP17.85■□□□□ 0.45
USP39-202ENST00000409025 CDH2P19022 906 aaPredicted RBP17.85■□□□□ 0.45
USP39-202ENST00000409025 PIGAP37287 484 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 MC3RP41968 323 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 CAPZBP47756 277 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 CSNK1EP49674 416 aaKnown RBP17.85■□□□□ 0.45
USP39-202ENST00000409025 XKP51811 444 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 C21orf59P57076 290 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 SIM1P81133 766 aaPredicted RBP17.85■□□□□ 0.45
USP39-202ENST00000409025 GNA13Q14344 377 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 SYPL1Q16563 259 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 DUSP7Q16829 419 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 CYP27C1Q4G0S4 372 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 SATL1Q86VE3 508 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 PIK3C3Q8NEB9 887 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 MIPOL1Q8TD10 442 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 DNASE2BQ8WZ79 361 aa17.85■□□□□ 0.45
USP39-202ENST00000409025 GRIP2Q9C0E4 1043 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms