RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 GGTA1PQ4G0N0 100 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 TEX35Q5T0J7 233 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 ADGRD1Q6QNK2 874 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 CEP112Q8N8E3 955 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 GOLM1Q8NBJ4 401 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 VKORC1Q9BQB6 163 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 WDR41Q9HAD4 459 aa17.82■□□□□ 0.44
SMARCB1-204ENST00000407422 NCKAP5O14513 1909 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 IQANK1A0A1B0GTG1 560 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 RIPK2O43353 540 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 GLSO94925 669 aaPredicted RBP17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 CLPSP04118 112 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 RHOXF2BP0C7M4 288 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 AGAP20933 346 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 DNASE1L1P49184 302 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC37A1P57057 533 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 SPRED3Q2MJR0 410 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 ZNF791Q3KP31 576 aaPredicted RBP17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 LYPD8Q6UX82 237 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM47EQ6ZV65 393 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 IFT20Q8IY31 132 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 ART5Q96L15 291 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 GAL3ST4Q96RP7 486 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM173AQ9BQD7 235 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 RHOXF2Q9BQY4 288 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 PELOQ9BRX2 385 aaKnown RBP17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 C1QTNF3Q9BXJ4 246 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 ELOVL6Q9H5J4 265 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 ZDHHC11Q9H8X9 412 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 SACM1LQ9NTJ5 587 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 TMEM216Q9P0N5 145 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 ZNF225Q9UK10 706 aa17.81■□□□□ 0.44
SMARCB1-204ENST00000407422 OTCP00480 354 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 PDYNP01213 254 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SNRPB2P08579 225 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC35E2P0CK97 266 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 FOXO1Q12778 655 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 LGSNQ5TDP6 509 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 OR52E8Q6IFG1 317 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 ARHGAP11AQ6P4F7 1023 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 RNF111Q6ZNA4 994 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 TIFABQ6ZNK6 161 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 GK5Q6ZS86 529 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 TRMT10CQ7L0Y3 403 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 MCEMP1Q8IX19 187 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 PHF10Q8WUB8 498 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 WWTR1Q9GZV5 400 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 FREM3P0C091 2139 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 C19orf84I3L1E1 186 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 ACOT7O00154 380 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 CLDN14O95500 239 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 P04436 131 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SSTR4P31391 388 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 PIGAP37287 484 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 EBPQ15125 230 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 EMC4Q5J8M3 183 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 CCNYL2Q5T2Q4 361 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 C10orf62Q5T681 223 aaPredicted RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 NDUFAF5Q5TEU4 345 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC22A16Q86VW1 577 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SRRM1Q8IYB3 904 aaKnown RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 METTL4Q8N3J2 472 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 MARVELD2Q8N4S9 558 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 TMEM251Q8N6I4 163 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 LRRN4CLQ8ND94 238 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC22A8Q8TCC7 542 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 TRPC4APQ8TEL6 797 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SPACA9Q96E40 222 aaPredicted RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 HBEGFQ99075 208 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 CXorf21Q9HAI6 301 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SH2D2AQ9NP31 389 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 CHST11Q9NPF2 352 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 TUBA8Q9NY65 449 aaPredicted RBP17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC12A4Q9UP95 1085 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 LIPGQ9Y5X9 500 aa17.8■□□□□ 0.44
SMARCB1-204ENST00000407422 PHF3Q92576 2039 aaKnown RBP17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 PDZD2O15018 2839 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 CT62P0C5K7 136 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 PIK3R1P27986 724 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 GALNSP34059 522 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 HSD17B3P37058 310 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 MAGEA5P43359 124 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 GALNT1Q10472 559 aaPredicted RBP17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC29A2Q14542 456 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 TCHHL1Q5QJ38 904 aaPredicted RBP17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 RGS9BPQ6ZS82 235 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC29A4Q7RTT9 530 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 COMMD6Q7Z4G1 85 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 MMP21Q8N119 569 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 SELENOMQ8WWX9 145 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 MTBPQ96DY7 904 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 TXLNGYQ9BZA5 131 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 EPB41L4BQ9H329 900 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 IL1RL2Q9HB29 575 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 AHSPQ9NZD4 102 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 ADAM29Q9UKF5 820 aa17.79■□□□□ 0.44
SMARCB1-204ENST00000407422 GOLGA8RI6L899 631 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 DLX3O60479 287 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 OR4F21O95013 312 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms