RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FAM86B1Q8N7N1 296 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 SCARF2Q96GP6 870 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF764Q96H86 408 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 HSH2DQ96JZ2 352 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 DEPDC7Q96QD5 511 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 TCEAL2Q9H3H9 227 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 RUBCNLQ9H714 662 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 SMURF2Q9HAU4 748 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 WASH6PQ9NQA3 447 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 MIEF1Q9NQG6 463 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 TAS2R9Q9NYW1 312 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ANGPT4Q9Y264 503 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 PADI2Q9Y2J8 665 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 PRKAB1Q9Y478 270 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 DGKBQ9Y6T7 804 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ARID1BQ8NFD5 2236 aaPredicted RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 A0A1W2PRB8 838 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 TMEM247A6NEH6 219 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 GUCY1B2O75343 617 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 JRKO75564 520 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 PDE9AO76083 593 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 TGFB1P01137 390 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 NTRK1P04629 796 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 MYF5P13349 255 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 CTSEP14091 401 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 CRHBPP24387 322 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 CHI3L1P36222 383 aaPredicted RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 CRATP43155 626 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ANXA11P50995 505 aaKnown RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ARFIP1P53367 373 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 SELENOWP63302 87 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 NKG7Q16617 165 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 IFI44LQ53G44 452 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 PRRT3Q5FWE3 981 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 C3orf38Q5JPI3 329 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 CATSPEREQ5SY80 951 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF547Q8IVP9 402 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 CLECL1Q8IZS7 167 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 SVOPQ8N4V2 548 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 OR5P2Q8WZ92 322 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 RGMAQ96B86 450 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ISOC1Q96CN7 298 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 DOK1Q99704 481 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ARHGAP9Q9BRR9 750 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 SLC35A5Q9BS91 424 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 TIMM29Q9BSF4 260 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 GULP1Q9UBP9 304 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 APOBEC3BQ9UH17 382 aaKnown RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 TDRKHQ9Y2W6 561 aaKnown RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 SAMHD1Q9Y3Z3 626 aaKnown RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF451Q9Y4E5 1061 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 HEBP2Q9Y5Z4 205 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 DOPEY2Q9Y3R5 2298 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 UNC79Q9P2D8 2635 aa12.23□□□□□ -0.45
SMARCB1-203ENST00000407082 K7ENP7 123 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 M0QX08 132 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 PIAS2O75928 621 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 ETHE1O95571 254 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 KLK1P06870 262 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 ANXA8P13928 327 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 GRK3P35626 688 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 TAS2R50P59544 299 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 IL5RAQ01344 420 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 MVKQ03426 396 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 C1orf61Q13536 156 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 RAB39AQ14964 217 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 TCEA2Q15560 299 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 KDM4DQ6B0I6 523 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 INO80CQ6PI98 192 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 ANGPTL8Q6UXH0 198 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 FAM92BQ6ZTR7 304 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 CHST15Q7LFX5 561 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 KANSL1Q7Z3B3 1105 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 C11orf96Q7Z7L8 435 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 SLC9B2Q86UD5 537 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 TSPYL5Q86VY4 417 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 FAM129CQ86XR2 697 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 SLC25A45Q8N413 288 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 RNF175Q8N4F7 328 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 ATG16L2Q8NAA4 619 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 ABHD11Q8NFV4 315 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 LMX1AQ8TE12 382 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 RAB2BQ8WUD1 216 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 IPCEF1Q8WWN9 437 aaPredicted RBP12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 RASSF5Q8WWW0 418 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 TPD52L3Q96J77 140 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 OR2M4Q96R27 311 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 MBOAT4Q96T53 435 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 TMEM168Q9H0V1 697 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 CHST8Q9H2A9 424 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 MVB12BQ9H7P6 319 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 NEUROD4Q9HD90 331 aa12.22□□□□□ -0.45
SMARCB1-203ENST00000407082 KRT84Q9NSB2 600 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms